Gene Mpal_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1876 
Symbol 
ID7272693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1991322 
End bp1992203 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID643570491 
Productnitrite and sulphite reductase 4Fe-4S region 
Protein accessionYP_002466904 
Protein GI219852472 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG TTGATGATCG GAATGATTCA CACTCTACAC CACAGAGGTT CGGCCTTCTC 
CGGCAGAAGG AGAAGGGGTA TTATTCAGTC CGGGTGAAGG CCGTTGCAGG GAACTGCACC
GCCCCGCAGC TCGCCCTGAT CGGGGAGCTG GCGACCCGGT ACGGGCGGGG ATACATCTCG
CTGACCACCC GGCTCAACCT TGAGATTCCC TGGGTGAAGA TCGCCGACGT CCCGGTGGTC
TGTGCTGCCC TGGATGAGGC CGGCCTCTCC ACCGGGTCCA CCGGCCGGAA TGTCCGTGCA
ATTGTCTGTT GCAAGGGAAC GGTCTGCCCG CATGGCCTCT ATGATACCCA GGAGACCTGT
CGGGAGCTGG ACCGGATATA CTACGGCAAA CCATTGCCGG CCAAGTTCAA GATCGGGATC
GCGGGTTGTC CAAACAACTG TACAAAGGCG CAGTTCAACG ACATCGGGAT CATGGGTCAG
CGCGTACCTC AGTTCGAGGC GTCGAACTGC ACCGGCTGCG GGGCCTGTGT GGTCGCCTGT
AAGGCCCGGG CGCTCCTGCT CGATGAGGAC GGTACCCTTC TGTTCCGACA GAGCCTCTGC
CTGAACTGTG GTACCTGCAT AGATCGCTGC CCTCACAATG CTGTTCGTCT GCTGGCCGAA
GGCGTCACGC TCTTCATCGG GGGGACCGCC GGCCGGCGGG TGATGGCCGG CCTTCCCCTT
GGCATGAGGA TTCCGCTCTC AGCATGTCCC GCTCTGGTGG AAGCCGTGCT CGTTGTCTTT
TTGCAGTACG GAGAACCCGG CGAGCGCTTC CGCTCGATGA TGGAACGGGT CGGGCCGGAA
CTGGTGCTCA GCACGATCAG AGATGTCGTT CAGGAACTCT GA
 
Protein sequence
MSAVDDRNDS HSTPQRFGLL RQKEKGYYSV RVKAVAGNCT APQLALIGEL ATRYGRGYIS 
LTTRLNLEIP WVKIADVPVV CAALDEAGLS TGSTGRNVRA IVCCKGTVCP HGLYDTQETC
RELDRIYYGK PLPAKFKIGI AGCPNNCTKA QFNDIGIMGQ RVPQFEASNC TGCGACVVAC
KARALLLDED GTLLFRQSLC LNCGTCIDRC PHNAVRLLAE GVTLFIGGTA GRRVMAGLPL
GMRIPLSACP ALVEAVLVVF LQYGEPGERF RSMMERVGPE LVLSTIRDVV QEL