| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1873 |
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| Symbol | |
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| ID | 7272690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1988964 |
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| End bp | 1989773 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570488 |
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| Product | hypothetical protein |
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| Protein accession | YP_002466901 |
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| Protein GI | 219852469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGT TAATCCGCCT GAAGGCCGAA CAGGATGGCC CTGTCCAGAA CCGTGCACTG
CACACGTTTG TTACCCAGGC TATGATGTGG GCGGGATCCC TGGGCCCGGC CCTGGCCCGG
GATGTCCCGA TATCCTACTC CCGCCTCTTT CCGTTCAAAG AGGTCAAGAC CGGAGATCTG
CAACAGTTGA TCATTGCGTC CCCTGCGCCA GAGGTGGCAC AGGGGATCGC TCGCTATCTT
TCACAGAAGA GGGGATCCCG AATCAACATC GGAGATGCAC AGTTCACGCT GCTCGGGCAT
CAGACCTTCT CGATCACCTT GCAGAAGAAC AGACTGATCC TTCGGAATGC AACCCCTCTG
ATCGTCCGGC TCTCCCCCAA GTGCATCAAT CAGTTTCAGA TCCAGGAATC GTCAAAGGGG
CCTGTCTTCT GGGGGGAGGG GATGCCCACG GAAGCGCTGA CTTTTGCCCT CACAGAATCG
TTGCTTTCCC GGTACAACCG TTGGAACGGG ACAAAAATTA AAGTGGAGAC GCTCTTTGCC
GAAGCCACCC TCTTTAGAAG TCTGCCTGCA AAACCATCAG GACAGAAGAA GAGCGGGACG
GCACCCAGCA GCCTCTGGGA GTTCCGCTGG ATTAAGATGA ACCAGGCACA GCGAAAGGTG
CTTGCATTCG GGATCGAAGC AGGATTCGGG GAGCGGACCG GGTCAGGGTA CGGTTTTATG
AATGTGATCA GAAAGGAAGA GACAACAGCT TCCAACACCG AGGGCTCAGA ACCAGACCAG
CACCCTGGGA CTGAACACCG GGAAGAGTGA
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| Protein sequence | MRLLIRLKAE QDGPVQNRAL HTFVTQAMMW AGSLGPALAR DVPISYSRLF PFKEVKTGDL
QQLIIASPAP EVAQGIARYL SQKRGSRINI GDAQFTLLGH QTFSITLQKN RLILRNATPL
IVRLSPKCIN QFQIQESSKG PVFWGEGMPT EALTFALTES LLSRYNRWNG TKIKVETLFA
EATLFRSLPA KPSGQKKSGT APSSLWEFRW IKMNQAQRKV LAFGIEAGFG ERTGSGYGFM
NVIRKEETTA SNTEGSEPDQ HPGTEHREE
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