| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1872 |
|---|
| Symbol | |
|---|
| ID | 7272689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1987242 |
|---|
| End bp | 1988846 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643570487 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_002466900 |
|---|
| Protein GI | 219852468 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.589962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG CTCAATTCCT GCTGGTTCTG CTGCTTTTAG GTGTGCTTCT GGTGTGTGCT
CTCCCGGCAG AAGCCGCCCC GATAGCACTG CCATCCCCTC CCCAGTTTCA TCTGACGCAT
AACAATACCA CCCCGGGAAT CACCGAGATC CCACCTCCAG TAGATAGGGT GATGGATAGA
ACCATCTCCG GGGTGGCTCT GTTTCTGCTC TATGTCGGGA TTTCATTATT ACTGTTGATC
ATCCTGATGA TACGAGCCGG GCGGAGGATG GACCCGCATC TCACCATCCC AATCAACGAA
GAACAACCGA TGTTTGACCT CGCCTATCTG GTCCTGGCCA TGGTCTCTGC TGTCGGGGTT
CTCTGGTTGT TGACCGTGAA CAGTGAATTA TTGATTCGAA TCGATCTCTA CGGGATCATC
GGACTGATCT GCTGCTTCCC GAGCGTCTTC TTCTCGCTCT TCTCAATCCG GATTGCAATC
GGAACAAAGC GGTTACAGGT GCAGCAGAGC ATGCTTCTGA TCCACCTGCT CGTGGCCATC
ATCGCTGCGA TCCTGCTCAG TCTCCTCCTG CTCCTGATCC CGGCATCATG GGAACTCCCG
TCACTGGCAC TCACGTACAT CTCCCTGATC GCCGGAGCGG TACTCTCAGC TGGACAATTC
CTCCATCATC GAGAACGACA CATGTTTGCC ACCATCGCAC CGATGCAGGC GCTCCAGTCT
GGTGCTGATG ATCAGAAGAC TCTCATTCCA TCTGCAAATG AGGAAGGGCT CCTCACAGAG
AAGGGTATTC CCGAGGCGAT CACCTCCCAG TACACCGACC TGAAGCCGGC AGCAACCGGA
GGGGTGGCAA GTGTCTTCTC TGCAACCCGG CGAAGCGACG GAATGAAGGT CGCCCTGAAA
CTCCCACTCA GGCATGATCT CGCAACTGGT GCGGGATTCT TAAAAGAGAT CCGGATCTGG
GAGCATCTGA ACCATCCCAA CATCGTCCGG CTCACCCATG TGTACCTGCT CCCAACCCTC
TGCCTGGAGA TGGAGTATGT TCCTTATCGA CTCACCGAAC AGATAGGGTC TATCACCCCA
GCACGGGCCA TCCTGATTGC AAAAGGAATC CTGAACGGAC TTGAATATGC GCACCTGCAC
GGATACAGCC ACTGCGATAT CAAGCCGGAA AATATCCTGC TCACCGAAGA GGGGATGGAA
GGGATCCCAA AGATCACCGA CTGGGGACTC TCCGAACATG CCGGCGAGAA GACCGGGATT
GCGTGCACCG CCTTTACCCC ATGGTATGCA GCTCCAGAAC AGATCGCTCC CGAACTGTAC
GGTCTTCCTG GGCCGGCCAC CGATCTCTAT CAGGTCGGAG TGCTGCTGTA TCTGATGCTG
ACCAGTGCCC ATCCCTTTGC AGGGAAAGAC ACCGACAGCA CCTGCAGAAT GATCCTGAAC
GATAGTCCAC TTCCCCTGTC TGCTCATCAG CCCGACCTGG CCCCCCTTGA TGAGGTGCTC
TTCAAATGTC TGGCCCGGAA TCCAAAGGAC CGGTACAGTT CCGCAGCCGA ACTCTCCGCA
GACCTTGTGA GAATTCATCA GCAGAACGAA GGTAGAGCAC AGTAA
|
|---|
| Protein sequence | MKPAQFLLVL LLLGVLLVCA LPAEAAPIAL PSPPQFHLTH NNTTPGITEI PPPVDRVMDR
TISGVALFLL YVGISLLLLI ILMIRAGRRM DPHLTIPINE EQPMFDLAYL VLAMVSAVGV
LWLLTVNSEL LIRIDLYGII GLICCFPSVF FSLFSIRIAI GTKRLQVQQS MLLIHLLVAI
IAAILLSLLL LLIPASWELP SLALTYISLI AGAVLSAGQF LHHRERHMFA TIAPMQALQS
GADDQKTLIP SANEEGLLTE KGIPEAITSQ YTDLKPAATG GVASVFSATR RSDGMKVALK
LPLRHDLATG AGFLKEIRIW EHLNHPNIVR LTHVYLLPTL CLEMEYVPYR LTEQIGSITP
ARAILIAKGI LNGLEYAHLH GYSHCDIKPE NILLTEEGME GIPKITDWGL SEHAGEKTGI
ACTAFTPWYA APEQIAPELY GLPGPATDLY QVGVLLYLML TSAHPFAGKD TDSTCRMILN
DSPLPLSAHQ PDLAPLDEVL FKCLARNPKD RYSSAAELSA DLVRIHQQNE GRAQ
|
|---|
| |