| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1852 |
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| Symbol | |
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| ID | 7272669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1966238 |
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| End bp | 1967272 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570467 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002466880 |
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| Protein GI | 219852448 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.390235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACC AGATCATCCT CGCCATCGCC GTCGTTCTGG CCGGACTCTG TGCTGCCGTT
ATCATCTACG AACTCGGGAT TCGACTGCAA CGCCGGCTCG CAACACTGCA GCACCCCTTC
TTCTCCTTCA GCGACTCGAT CCTGATCGCC CTCGGGAGAC CGCTGATCGT GGCCGTCATC
ACCGTGACGA TCTACGTGGC GCTCAAATAC TTCACGCCCC TCCCCGACAC CTACCTCTGG
CTCCTCGACA GCCGGTATCT GATCGCCGTC TATGTGCTCA TCGGAGCCTG GATCGTCTCG
AACTTCTCGC TCACCATCAT CAAGAACTAT GCGGCCTGGC AGGAAGCCCG TCCAGACCGG
CAGGTCGACA TGCGGTTTCT GGACCTGCTC AGACTCTCTG CACAGTACCT GATCTGGTTC
ATCGCCCTCC TCTTCATCCT CTCCTACCTC GACATCAACA TCACTCCCCT GCTGGCCGGG
GCCGGAATCG CCGGACTGGC CGTCGCCCTG GCCGCCCAGG ACCTCCTCTC GAACATGCTC
GGGGGGGCCA TCATCATGGT CGACCGCCCC TTCACCCTCA ACGACAAGGT GAAGATCGAA
CCATATACCG GCACCGTGAT CAGAGTAGGA ATCCGGTCGA CACGGCTCAA GACCATAGAA
CATCAGATCG TGACCATCCC CAATGCGAAG ATCTCAGGGA ATATCGTGGT CAACTACTCG
GTCCCTGACG TCATGCAGAA GGTCAGGGTC AGGGTCCCGG TCCGGTATGG ATCATCGATC
GAGCAGACCA GAGAACACGT CAAAACAGTC GCCACCAGGG TTGCTGAAAA GGTGGCCGGC
AACCGCACCG ACCTTTCCCC CCCGGAGGTC TATCTGACCA ACTTTATGAA GGATTACCTG
ATCTTTGAAC TGGTCGTCTG CGGGCCCGAC GAGATCGATC AGGGTGCTAT CAAGGACCTG
GTCTATTGTG AGATCGCAAA AGAAGGGGAG GGACTCCTGA TCCCATTCCC GCCAGAACCA
AGAGATCAGC CCTGA
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| Protein sequence | MQDQIILAIA VVLAGLCAAV IIYELGIRLQ RRLATLQHPF FSFSDSILIA LGRPLIVAVI
TVTIYVALKY FTPLPDTYLW LLDSRYLIAV YVLIGAWIVS NFSLTIIKNY AAWQEARPDR
QVDMRFLDLL RLSAQYLIWF IALLFILSYL DINITPLLAG AGIAGLAVAL AAQDLLSNML
GGAIIMVDRP FTLNDKVKIE PYTGTVIRVG IRSTRLKTIE HQIVTIPNAK ISGNIVVNYS
VPDVMQKVRV RVPVRYGSSI EQTREHVKTV ATRVAEKVAG NRTDLSPPEV YLTNFMKDYL
IFELVVCGPD EIDQGAIKDL VYCEIAKEGE GLLIPFPPEP RDQP
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