| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1851 |
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| Symbol | |
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| ID | 7272668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1965167 |
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| End bp | 1966192 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643570466 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002466879 |
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| Protein GI | 219852447 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.665082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTG GAAAGGAGAT CGTCGAAACA CTGCGGCAGA CAGTGGACAG GGATATTTCG
CTGATGCATA TCTGCGGGAC GCATGAGGCT GCTATCGCCC GGCATGGGAT CCGGAGTGTG
CTTCCGGAGA GGTTGAAGAT CGTGATGGGA CCCGGCTGTC CGGTCTGTAT CACTCCCCAG
GGGGAGATCG ATGCTGCGGT GGAACTGGCT GAACGCGGCT GCATTGTGGC CACCTACGGG
GACCTGATCC GGGTGCCCGG GTCGAAGGGG ACCCTGGAGT CGTCGGGCGG GGATGTCAGG
ATCGTTCAGG GGGTTCACAA GGCGGTGGAG ATCGCCGAAC AGACCGATCG TGAGGTGGTC
TTCATCTCGG TGGGGTTCGA GACGACGGCT CCGACGGTGG CCGCGACCCT GCTGGCGAAA
CCGCCGGAGA ACTTCAGTAT CCTCTCCTGT CACCGGCTGG TGCCGCCGGC GATGAAATGG
CTTCTCGCGC AGGGTGAGGG GAAGATCGAC GGTTTTCTCC TTCCGGGGCA TGTCTGCGTG
GTGATGGGCT ACCAGGAGTA CGAGCAGTTC CCGGTGCCGC AGGTGGTCGC CGGCTTCGAG
GCCGAGGATG TGCTGCTCGG TCTGCTGATG CTCGTCCGGC AGGTGAAGGA GGGGCGGGCC
GATGTCGAGA ATGCCTATCC CCGTGCCGTG AGCCGGGAGG GGAATGTCAA GGCTCAGCAC
CTGATGTACG AGGTCTTCGA GGCCTGCGAT GTCGAGTGGC GCGGGTTCCC GGTGATTCCG
CAGTCCGGGC TTACACTGCG GGAGGAGTTC GCCGGCTACG ATGCCCAGCG GAAGTTCGAT
CTAGTCTACA AGAAGGTGAC CAAGCCCTCG GCCTGTATCT GCGACCGTGT GCTCCGGGGG
GTGGCCCAGC CCTCGGACTG CGCCCTCTTC GGGAAGGTCT GTACGCCCCG GACGCCGGTC
GGCCCCTGCA TGGTCAGCCA CGAGGGGGCC TGCAAGATCT GGCAGACCTA TCATCAGCGG
CATTGA
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| Protein sequence | MAVGKEIVET LRQTVDRDIS LMHICGTHEA AIARHGIRSV LPERLKIVMG PGCPVCITPQ
GEIDAAVELA ERGCIVATYG DLIRVPGSKG TLESSGGDVR IVQGVHKAVE IAEQTDREVV
FISVGFETTA PTVAATLLAK PPENFSILSC HRLVPPAMKW LLAQGEGKID GFLLPGHVCV
VMGYQEYEQF PVPQVVAGFE AEDVLLGLLM LVRQVKEGRA DVENAYPRAV SREGNVKAQH
LMYEVFEACD VEWRGFPVIP QSGLTLREEF AGYDAQRKFD LVYKKVTKPS ACICDRVLRG
VAQPSDCALF GKVCTPRTPV GPCMVSHEGA CKIWQTYHQR H
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