Gene Mpal_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1832 
Symbol 
ID7270378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1945010 
End bp1945591 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content58% 
IMG OID643570447 
ProductAMMECR1 domain protein 
Protein accessionYP_002466861 
Protein GI219852429 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.262195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.158131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA TACATCCAGA CACCATGTCT GACTTACGTG AAGAGGAAGG GAGACTGGCG 
GTGCGCCTTG CACGTCAGTC TCTCCATTCA ACGGTCACCG GAGAACAGAA TCCGCTCCCG
TCCCTCCCAC AGGTCTTTAA CGAGAAGAGG GGCGTCTTTG TGACCCTGAC CAGGTCCGGT
CAACTGCGGG GATGCATCGG TTTTCCCTAT CCGGTCGCCC CGCTCGGAGA AGCGATCGTC
AACGCTGCCC ATGCTGCTGC CGTTGAGGAT CCCAGGTTTC ATCCGGTTCG TGTTGAGGAA
CTGGATTCGA TCAGGGTTGA GGTGACCGTC CTGACCGAAC CAGTGGTGAT CGAAGGGCCG
GCGGCTGAAA GGGAAGAGAA GGTCGAGGTC GGCCGGCACG GTCTGATCGT CAAGGGACGG
GGGACCAGCG GTCTCCTCCT TCCCCAGGTG GCGACCGAGT TCAATTGGGA GAGTGACGAG
TTCCTGAACA GTGTCTGTGC TAAGGCCGGA ATGGCTGGCA GATGCTGGCG TGATCAGGAT
GTGGAGGTCT CCACCTTTGA GGGCCAGATC TTTCATGAAT AA
 
Protein sequence
MNAIHPDTMS DLREEEGRLA VRLARQSLHS TVTGEQNPLP SLPQVFNEKR GVFVTLTRSG 
QLRGCIGFPY PVAPLGEAIV NAAHAAAVED PRFHPVRVEE LDSIRVEVTV LTEPVVIEGP
AAEREEKVEV GRHGLIVKGR GTSGLLLPQV ATEFNWESDE FLNSVCAKAG MAGRCWRDQD
VEVSTFEGQI FHE