| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1830 |
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| Symbol | |
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| ID | 7270376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1941929 |
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| End bp | 1943554 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643570445 |
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| Product | PUA domain containing protein |
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| Protein accession | YP_002466859 |
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| Protein GI | 219852427 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain |
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| TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.214323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.168239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTG AGATCCGATC ACGGGACGGG CTGGCACGGT CGGGGATCCT CAGGGAGGGT
GAGACCTCCC TGCGGTTGCC GGCTGTGGTG GATGCGTCTT CATTCTTCTC CACCAGCCTG
GACCGCCCGT TCACCAACGT ACCGCTCGGA GCCCCGCAGG GGTTGGCCGA ACAGTATCTG
GTCGCCGGAG AACATCCGAC CACAGTCCAT CCGCAGAAGC CTGTTCCTGT GCCGGACGGC
GATATCGCGA TGGTCGCAAA CTGGCACACG GCACTGCAGA ATCCGCGCCA GTATGTGGAC
TGGCTGATCA GCCTGAAGAC CGATGTCCGG GCCGATACCG CCTGGTATGC CCCGGCAGCG
GCCCTGCCCT CGACGGTCTG GATGCTGATC GCCACGGGGT TCGATCTCTT CGACACCACG
GCTGTCGATC TGAAGTCGGC TCAGGGGATC TTCTGTCTGC CTGAAGGCGA GTTTCCGGCC
GACCTGCTCG ACCAGGGGGT CTGTGCCTGT CAGGGGTGCA GGGACCATGA TCTGAAGGTT
CACAACCGGC TCGCGCTAGA GGCTGAGGTG AACAGGGTCG GTGTCTTTTT GCAGAAGGGC
CAGCTCAGGG AACTGGCCGA GGCCCGGTGC CGGTTGAATG CCGCGCAGGT CTCGGTCCTC
CGGCACCTCG ACAACCACTA TGATTTTGTC GAGCAGTGGA CACCGGTGGC CCGGACTGCC
ACCTTCAAGG CCAACTCAGG CGATTCGATG AACCGGCCCG AGGTGAAACG GTATATGGAC
CGGCTTCTGA CCCGGTACAT CCCGCCATCT GCCGAGGTCG CCGTCCTCCT TCCCTGTTCT
GCACGAAAAC CCTACTCGCG GTCGCAGAGC CACCGGAAGT TCATCAACAC CGTCGCCGGC
AGGGCGCATG AGATCATCAT CACCTCTCCG CTCGGTGTCG TTCCCCGTGA GATCGAACTC
TGTTACCCGG CCGCCCACTA CGATGTGCCC GTGACTGGGT ACTGGGACCG CGAAGAGGTG
GCGGTTCTGG CCGATGTGCT GGCGAAGTAC CTGGCCAAAC ACCAGTATCG GCGCGTGATC
GCTCATCTGG AGGGAGGGGC GATGCAGGTG GCTGCGATGG CCGCCGACAT CTGCGGGATC
ACTCTCGAAT GCACGGTGAG GGATCACCCG ACCTCTGGGG GATCGCTCTC GGCGCTGGAT
GCGGCGCTTG CCGGGGAACG GCGGGTCCGG TCCGATCAGA TCAAGGGGAT GCTCTCGTTC
CAGTTCGATG CCGATGTCGA CACGGCCGGG ATGCAGGTCC GGGGCAAGTT CCCGCGTCTC
TCGGTGATGC GGAACCGCCG ACCGCTCTTC AGCCTCGACA CCACCACCGG GATGCTCAGA
CCGACCTTCG AGGGCTGGTC GCTAATCCCC CGTGGATACC GGGTGGTCAT CGACGATTTT
GTTCCGCAGG GGGATATCCT GGCGCCGGGT GTGCTCAGTG CAGACCCGGT CATCAGGGAA
GGGGACGAGG TCCTGGTCGA AGGGCCGCAT GCGCTCGCCA CCGGCAGAGC TGCGATGGGG
GCCTTCGAGA TGGCCCGTTC CAACCATGGT GTGGCGGTCA GAAGGCGTAA GGTAATGAAA
CGGTAG
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| Protein sequence | MIFEIRSRDG LARSGILREG ETSLRLPAVV DASSFFSTSL DRPFTNVPLG APQGLAEQYL
VAGEHPTTVH PQKPVPVPDG DIAMVANWHT ALQNPRQYVD WLISLKTDVR ADTAWYAPAA
ALPSTVWMLI ATGFDLFDTT AVDLKSAQGI FCLPEGEFPA DLLDQGVCAC QGCRDHDLKV
HNRLALEAEV NRVGVFLQKG QLRELAEARC RLNAAQVSVL RHLDNHYDFV EQWTPVARTA
TFKANSGDSM NRPEVKRYMD RLLTRYIPPS AEVAVLLPCS ARKPYSRSQS HRKFINTVAG
RAHEIIITSP LGVVPREIEL CYPAAHYDVP VTGYWDREEV AVLADVLAKY LAKHQYRRVI
AHLEGGAMQV AAMAADICGI TLECTVRDHP TSGGSLSALD AALAGERRVR SDQIKGMLSF
QFDADVDTAG MQVRGKFPRL SVMRNRRPLF SLDTTTGMLR PTFEGWSLIP RGYRVVIDDF
VPQGDILAPG VLSADPVIRE GDEVLVEGPH ALATGRAAMG AFEMARSNHG VAVRRRKVMK
R
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