| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1818 |
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| Symbol | |
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| ID | 7270364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1924185 |
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| End bp | 1927115 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570433 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002466847 |
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| Protein GI | 219852415 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC GTGAGAAGAT CCTGCTTGCA CTCGCCGTCA CCCTTATCTC TGTGCTTGTG
GTGATGCTCT TCTTTACGGC GACGGTCATA CGGGACGGCT ACGTCAACCT CGAGACCGAT
CAGATGCAGC ACGAAGCGAG TCAGGCCCGG GCAGCAGTCG ATGCCGATCT CTCCACCATC
AACTCCCATC TGATGGAACG GGCTGCATGG AATGACACCT TCACCTTTGT CACCGATCCC
ACTGATCGGA GTTATGTCAG TACAAACAAT ATCTCCCAGA CCTTTACAAC CTGCGACATC
AATGTTCTGT TGATCTATGA TCATGATCAC CGGTTGCTAT ACGGTCAGGG GTTCAACCTG
AGCAGCGATA CTTTTGAGCA GTTCTCTCCT CTCCTCCTCG ATACCATCTC AACAACGCCA
GGTTTTTTGA ATGTGACTGC AGAGGAGGGG TCGAAGACCG GGATTCTGAT GGTCGGGGAT
CAGCCGATGC TGCTGGCTTC GCAACCGGTT CTGACCAGTT CCTTTCTCGG TCCGAGTCCA
GGGGTCATGA TGATGGGGCA GTATCTGGAC CCCGCACAGG TGAACCGTCT TGCAGAACAA
TCTGGTGTTC CCTTCACTCT GGTTCAGAAC CGGTCTGCAG TCGGTCCCGT CTCGATGGAT
AGCGTATCGA TCTCTTCACT GAACAGTTCC CAGGTCGCTG CTGTGCTGCC ACTCTCCGAC
GTCGCCGGCA CCGGATCGCT GCTGATCCGG GTGCAGGAGC CACGCACGAT CGTTTTGAAT
GGGGCTGAAA GTGCCAGAAC CTTCATCATG ACCACGATGC TGATCAGTCT CCTCTTCGTG
TTTCTGAGCC TTGGATTTGT GGACCGGACG GTCCTTACAC GGTTGAACCG TCTGATTACG
GGTGTCAGGG CGATAAGGAT GAATGGCGAG AATGCACGAA TAGAAGGTAT CGCCGGCAGT
GACGAACTGG CCCTCCTCTC AGCTGCGATC AACGGGATGC TGGATGAACT CTCACTGGCC
CATCAGTCGA CCCGGGAGAG CGAAGAACGG TACCGGACCC TTGCAGAGTC CGCGCAGGAC
CTGATCTTCC TCTTTGGAAC GGACGGCCGG CTCACCTATG CGAATCCGAC CGCTCTGGCC
ACGCTCAGGA TGACCAGCAG GGAGTCTTTT GGGCAGACGT TCACCGGGCT CTTTTCATCA
GAGGAGAGTT CTTCGGCCGC CACTGTGTTT CAGATGGTCC TCGAGACCAG GACCCCCAAT
CGTTTTGAGG TCGATGGTAC GATCGCCGGT TCTGACCATT GCTTTGATGT GGAGGTGATC
CCCCTCATCA ATCCTGACGG GGGATTTGGT GAAGTGATGG GAATTGCCCG GGACATCACC
GAGCGGAAAC GAGTGGAAGA GACGATACGG TATATGAATG CCTACAACCG GTCGCTGATC
GAGATCAGTC GTGATCTGCT GATCATCGTC GATCCGGATG GAATCATCAC GGATCTGAAT
GCGACCTCTG AACAGGTGCT TGGATTCCTT CGCCAGGACA TGATCGGTAC CCGGCTCGCC
GAGCACTTCA CTGAGCCTGC CCTTATTAGA GACTGCTGTC AGGGGGTGCT GGATAACGGT
ATTCGCAGGG AGTCAGAAGT TTGTATCCGT CATCGTGAAG GTCATATCAT TCCACTTCAC
TGTACTGCAT CACTCTTTCG GGATTATGAG GGAACCCTGA TCGGAGTGCT GGTGGCGGCC
AGAGATATCA GTGAGGAGAA TCAGATGGAG GAGGATCGGC TCAGACTGGC AAAGCTCGAG
ACTCTGGGGG TGATGTCCGG TTCACTGGCT CACCAGTTCA ACAACCTGCA CACCAGTATC
CTTGGGAACC TGACACTTGC CAGGTCGATG CTCTATGACC GGGAGGCTCT GCTCGGTCGA
CTTGACGAGG CTGAAGACCA GCTCACCAGG GCGAGGATGG TGACCAACAA ACTGCTCACC
TTCTCCAGAG GCGGCGAGCC GCTCCGGTCT TTCCAGGAGG TTGAACCGCT GCTCCACGAG
GCTGCTGAAA ACTGTAATGG ACGTGGATCG TATCAGATCG AATACCGGGT CAGTGACGAT
CTCCCCAGGG TATTCCTCGA TCGGGATCAG ATCGTTGAGG CCTTGCAGCA ACTGATCACG
AATGCCATGG AGGCGATGCC CAGAGGTGGC ACCATCACTA TTGTTGCAGA ACTCTGCGAC
AGAACAGATG GAGAAAGGGA GCCTCAACTC TGCATTCGTG TGATTGACAT CGGTCAGGGG
ATCCCTGACG AGAACCAGAA GAAGATCTTT GAGCTCAACT TCACCACCAA GGACGGGGCA
GCGGGACTCG GACTTCCCCT CGCCCGCTCG GTGATCCAGA AGCACGGGGG GGAGATCGAG
GTATCTTCTG GTCCTGGCGG GGGGACCATC GTCACCTTTA TGATCCCGAT CGGACATGAC
CGCCCGCTGG ACCTTGCCCC GCGCCTCCCC ACCGGCCGCA CCCGTGTCCT GATCATGGAT
GATGAGGAGG CCATCACCGA TATCCTCAGA ATCTGGCTCA CCCGGCGTGG ATACGATCCG
GTGATCACCG ATGATGGGGT CTCTGCGATT CAGGCCTATC AGGAGGCGAT GATCCAGCAC
CGGCCGTTCG ATATCGTCTT TCTCGACCTG ATCGTCCCCG GGGGGATGGG TGGTGAGGAG
ACGATGAGAG GTCTTCTCTC CCTTGATCGG GCGGTGCGGG CCGTCGTCTG CAGCGGTTAC
TCCAACGACC CGGTGATGGC CTCGTATCTG GACTATGGTT TCGTCGGTCT TCTCCCCAAA
CCGTTTCAAC TCACTGCGAT GGAAGAACTG ATCCAGTCGA TTCTGCTGGG AACAAAAGGT
GCGATGCCAT CCGATCCGAA CAACTCAGTC ATCTCTGACC AGCCTGAGTG A
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| Protein sequence | MKLREKILLA LAVTLISVLV VMLFFTATVI RDGYVNLETD QMQHEASQAR AAVDADLSTI
NSHLMERAAW NDTFTFVTDP TDRSYVSTNN ISQTFTTCDI NVLLIYDHDH RLLYGQGFNL
SSDTFEQFSP LLLDTISTTP GFLNVTAEEG SKTGILMVGD QPMLLASQPV LTSSFLGPSP
GVMMMGQYLD PAQVNRLAEQ SGVPFTLVQN RSAVGPVSMD SVSISSLNSS QVAAVLPLSD
VAGTGSLLIR VQEPRTIVLN GAESARTFIM TTMLISLLFV FLSLGFVDRT VLTRLNRLIT
GVRAIRMNGE NARIEGIAGS DELALLSAAI NGMLDELSLA HQSTRESEER YRTLAESAQD
LIFLFGTDGR LTYANPTALA TLRMTSRESF GQTFTGLFSS EESSSAATVF QMVLETRTPN
RFEVDGTIAG SDHCFDVEVI PLINPDGGFG EVMGIARDIT ERKRVEETIR YMNAYNRSLI
EISRDLLIIV DPDGIITDLN ATSEQVLGFL RQDMIGTRLA EHFTEPALIR DCCQGVLDNG
IRRESEVCIR HREGHIIPLH CTASLFRDYE GTLIGVLVAA RDISEENQME EDRLRLAKLE
TLGVMSGSLA HQFNNLHTSI LGNLTLARSM LYDREALLGR LDEAEDQLTR ARMVTNKLLT
FSRGGEPLRS FQEVEPLLHE AAENCNGRGS YQIEYRVSDD LPRVFLDRDQ IVEALQQLIT
NAMEAMPRGG TITIVAELCD RTDGEREPQL CIRVIDIGQG IPDENQKKIF ELNFTTKDGA
AGLGLPLARS VIQKHGGEIE VSSGPGGGTI VTFMIPIGHD RPLDLAPRLP TGRTRVLIMD
DEEAITDILR IWLTRRGYDP VITDDGVSAI QAYQEAMIQH RPFDIVFLDL IVPGGMGGEE
TMRGLLSLDR AVRAVVCSGY SNDPVMASYL DYGFVGLLPK PFQLTAMEEL IQSILLGTKG
AMPSDPNNSV ISDQPE
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