| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1809 |
|---|
| Symbol | |
|---|
| ID | 7270355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1902911 |
|---|
| End bp | 1903945 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643570424 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_002466838 |
|---|
| Protein GI | 219852406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.796704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATC ATACAACCCG GAGGAGATAT GCCGTACTCA GCTGCGTGAT GCTTTTGGCG
CTGCTCCTGG TCTGTGTCCT GCCGGTGCTG GCCGCAGATA CCGTTAAGGA ACAGATTCCC
GCGAAGAACC ATATCAATAT CCAGGTCGCC AACAGTGATG GCGCCAGATT TGATCTCTTC
CATAACAACA CCTATTACAT CAAGTTTGAT GGTGGCGGGT TGAATGCCCT GCATATCACG
ACTAATCCTG CTGAGCCGTT TGGGCAGGTG ACCAATTCCA CCAGTACCTC GGGGAGTTTT
TTCCTCTCGG ATACCGGGGG ACGGGGTTTT GATGACGATC TCATCCTGAT GCTCGCGGTT
CAGGGAAAGG TTCCCGATGA TTTCAAGGTC CATATCAACT CGAGCGGGTA CCAGTGGGAC
CCGGTTCCTG TCCTGAACCA GCCGCCGGAT AAGAACGACC TCACCTATGT GGACGGGGCC
CTGAACGAAA CCTTCACAGC ATCTGATTTC ACCTATGCGC CCCAGGCCTG GAAACCGGCC
GGGCTTGCGA ATTATCCCCT GATCGAAGGT GAGGATATGA AGGACCCGGC CAACACCTAT
TCGCTTCTCT TCGTCGATAC GAAGGTCGGT GCCCTGGGTT CCAACAGCAA TCTCAGTGGC
ATCAAGGATA GCGGGGCTGC AAAGGTGGAG TACTCCTTTG ACAACCTGAA GACCAAGACC
GCCTTCAACA CCTATGCCTA CAACAATATG TCCAACCAGG GCCAGGGGAT CTCGTGGACC
AACCAGGTCT CTGAAACCGG GAGTAGCGGG TATGTGGTCT ACGGTTCAGA GTCCCTCTCC
GACTTCACCC CCTCGAACAC GACCACTCTG GATCCTGCCA GCCGATCCAC GCCGGCTCAT
CCTCGCAATG GTAACAATTC GGGCGCAGCA CCGACGTCAT CGCCGGCAGC ACAGCATCCT
TCCGGTCTGA TGGAGACGAT CACCGGCTGG ATCTCAACGC TCTTCCATTC GCTTGGACTG
AGTGGGTCCC CATGA
|
|---|
| Protein sequence | MHNHTTRRRY AVLSCVMLLA LLLVCVLPVL AADTVKEQIP AKNHINIQVA NSDGARFDLF
HNNTYYIKFD GGGLNALHIT TNPAEPFGQV TNSTSTSGSF FLSDTGGRGF DDDLILMLAV
QGKVPDDFKV HINSSGYQWD PVPVLNQPPD KNDLTYVDGA LNETFTASDF TYAPQAWKPA
GLANYPLIEG EDMKDPANTY SLLFVDTKVG ALGSNSNLSG IKDSGAAKVE YSFDNLKTKT
AFNTYAYNNM SNQGQGISWT NQVSETGSSG YVVYGSESLS DFTPSNTTTL DPASRSTPAH
PRNGNNSGAA PTSSPAAQHP SGLMETITGW ISTLFHSLGL SGSP
|
|---|
| |