Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1804 |
Symbol | |
ID | 7270350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1897675 |
End bp | 1898268 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643570419 |
Product | periplasmic binding protein |
Protein accession | YP_002466833 |
Protein GI | 219852401 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCGCC ATCAACTCTA TGTTCATGAG GATATTCCCT ACACCTCTCA TAATTCCTGT GGAGTCATCC ATATCTGCGA AGAGAATCCG CGGATTGCAG CATATGTTTT CTCCCTGGCG CAGGATATGA TGCTCGACGA TTTCATCGAT GGGAGCGATC CTGGAGTCGC GGTCGCCCTC ACCGAACAGA TAGCCCCTTC CCTGGTGGCC TATGGACGCG ATGCGCAGCA TACGATCCTG GACCAGATCA GGGCGCGGAC CCTTGCCCGA AATCTGAATA TCCCACTCCT GGGGCTTGGC GGGACTGAGG ACGGGGTGAT CGGGGCGATG GCAGGGCTCG CGCTCGCTTC GACGCGGAAT GACGGGCGGT TTCTGCAACT GGGCAAGATC CGGGATTTCA CCGGTCCCAG CACGGTGGAG GAGCTGCTCG CGGGCGGCAT CGATGAGGTC TGGAATATCG CAGGGCCGAG AGTCACCAGC GGAACCGTGC AGAATCCGGA AGGGAAATCT CCCAAAGCCT GTCCGGTCAA TGGAAGGGCG ATCCTGTTTG TAGAGGAGCG CGACGGCGAA CTCTTCCCGA TCAAGAGGGA CTGA
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Protein sequence | MTRHQLYVHE DIPYTSHNSC GVIHICEENP RIAAYVFSLA QDMMLDDFID GSDPGVAVAL TEQIAPSLVA YGRDAQHTIL DQIRARTLAR NLNIPLLGLG GTEDGVIGAM AGLALASTRN DGRFLQLGKI RDFTGPSTVE ELLAGGIDEV WNIAGPRVTS GTVQNPEGKS PKACPVNGRA ILFVEERDGE LFPIKRD
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