| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1783 |
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| Symbol | |
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| ID | 7270329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1864637 |
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| End bp | 1872301 |
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| Gene Length | 7665 bp |
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| Protein Length | 2554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570399 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002466813 |
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| Protein GI | 219852381 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGTT ACCGTAAACC AGGAGAGTTC CTTCTCCTCA TGATCATCAT GATCGCCGCT
CTGGCGACCC CGGCCCTGGC CGGACTTGTA CTGCCCAACG ACACCGGCAC CGGTGCCTCG
ATCAACCAGC AGACGCTCTC GCTCCCGCTC AGCTTCATCG AGAATCAGGG GCAGTCGCCC
GACGTGGTGA AGTACCAGGT CAATGCGGCC GGCCACTCGA TCGCGTTTGA GCCGGATCGG
ATCGTGCTCG CGGCCAGCCA GGACGTGAAT AACACGACGA AAAGCGCTGA AGTCACGATG
ACCTTCCCCG GCTCCTCTGC CTCGCCGGCG ATCGCCGGCC TCGACCGCCT GCCCGGGAAC
GCGAGCTTCT TCCTCGGCAA CGACTCGTCC AGATGGCAGA GTGACGTGCC GACCTATCGA
TCGGTCGAGT ACCAGCAGCT GTACCCCGGC ATCGACCTCC GGTACAACGG TACCCAGGGT
GTCCTGAAGC GTGAATTCGT CGTCGCACCC GGAACCAGCC CCGACCAGAT CGCCATCGCC
TACGACGGCA TCGACGGGCT CGCAATCGCT GAAAATGGTT CGCTTGCCAT CACCACCTCC
CTCGGAGTGC TGACCGACGA GGCCCCGGTC GCCTACCAGG CGATCGACGG CATAAAGGTA
CCGGTCACGT CTTCGTACCG TCTGAAGGAC GACGGGACCG TCGGGTTCAC GGTCGGAGCC
TACGACCAGT CCCGGCCGCT CGTCATCGAC CCGACCCTGC TCTACTCCTC GTACTTCGGC
GGATCGAATC AGGACTTCAT CACCCGCGTC CGCCTCGACT CGGCCGGCAA CATCTATCTC
GCGGGCTTGA CCAGCTCGGC CGATTTCACA ATTCAGAACT CCAACCAGGC TCCTGGAGGC
TCAAATGATG CCTTCGTGAC GAAGCTGAAC CCCGAGGGGA CTGCGGTCCT CTACTCTTCG
TACCTCGGCG GTTCCGGGGA CGATGTCGTC CGGGGCATGA GTATCGATGG TTCAGGAAAC
ATCTACCTGG CTGGCGTAAC GGCATCCACT GATTTTCCTC TCCAGTCGCC CTTCCAGCTC
ACAAACAACG AGGGCAAGGC CGGGTTCGTG ACGAAGTTGA ACCCCTCCAA TCCTGCCGGC
TCGCAGCTTG TCTACTCCAC CTATATCGAC GGTAACACCG GAAACGGGGT TAGCACAGGT
GCCAATGGCA TCGTCGCCGA CCCGTCCGGA GGCGCCTATG TAGCAGGGGT TTCGAACAGC
CCCACGCTCC CGGTCACCGC CGATGCCGCT CAGCCGGCCC TTAGCGGGAC GTACGATGCC
TACCTTGCCA GGATCGGTTC TGATGGCTCA CTGATGTATC TGACCTACCT CGGCGGCGCC
AAGGATGAAG GGGGGTCAAA TTATGTGAGC ACCGCCGGAT CAACCCCTGG CATCATGGGG
ATCGGCCTCG ATTCGGCCGG CAACGTCTAC GTCTCTGGTT CCACCAAGTC CACTGACTTC
CCGACCCTGA ATCCATACCA ATCGGTTCAT GGAGGGACCA CCACGGTAAC CGATGCGTTC
GTCGCCAAGT ACACCGCGAC AGGCTCGAAG GTGTATGCAA CGTACCTCGG AGGAACGACC
AGTGACGTCG CCTATGACCT CGCCGTCGAT CCGGCAGGAG CGGTCTACGT CACTGGAAAT
ACCGGGTCCA CCAACTTTCC CCTGGTCAAC CCGGCCCAGA GTGCGATGAA GGGGACCTCA
ACCGCCTTCA TCACCAAGAT CGATCCCTCC GGCACCTCTC TCGATTACTC GACCTACTGG
GGAGGGTCTT CGGGCACGAA TACCCCATAC AGCATCGCCG TGGATGGCGC TGGAGATGCG
TATGTGGCCG GGGCAACACT GTCCACGGAT TACCCCATCA TCAACGGGGC ACAAAGTGCC
TTTTCTGGAC GCACTGACGG TTTCGTCGTC AAGTTCGGGC CCGCGGGGAA CGCGCTGTAC
TCGACCGTTA TCGGTGGCAA TGGTGAAAAC TGTAACAACT TCTTCTATGG TATCGGGGTC
AACGACCAGG GGGATGCCGT TGTGGGTGGT AGTACAAGTT CAAATTACCC GACGACAGCT
TCTGCCATCC AGCAGACCAA CAGGGATACA CTCCCTGGTT ATTGCGGTAT CTTCTCGATC
CTGACCGATA AGGCCGTGGC CGACTTCACC GCCACTCCGA CCACCGGGTA TGCACCGCTC
TCGGTGCAGT TCAACGACAC CTCGAAAGGG TCCCCGACGA ACTGGTCGTG GGACTTCGGC
GACAACGCCA CCTCGACCGA GCAGAACGCT ACCCACACCT ACACGGCTGC CGGCCTGTAC
TCGGTCAACC TGACCGCCTC GAACTCGCTC GGGAGCACCC ATCTCCAGAA GACCGATTAT
ATCACGGTCC TCGACCGCCC GGGCCTGCCT GAGGCGAACT TCACCGCGAA CGTGACGAAC
GGCACCGCCC CGCTTGCCGT CCAGTTCAAT GACACCTCGC TGGGCGGGAA CCTGACGGCG
TGGTCGTGGG TGTTCGGCGA CGGCGCCACC TCGACCGAGC AGAACCCGGT CCACACCTAT
GCAGCAGGCG GGAACTACAC CGTGAACCTG ACGGTCACCA ATTCCGGCGG CTCCAACTCG
ACCGAGAAGG TCGACTACAT ATCAGTCGCC CGGCAGCCCC TGCCTGAGGC GAACTTCACG
GCGAACGTGA CGACCGGTAT CGCCCCGCTG TCGGTGCAGT TCAACGACAC CTCATTGGGT
GCGAACCTGA CGGCGTGGTC CTGGGCGTTC GGCGACGGGA ACATCTCGAC CGAACAGAAC
CCGATCCATA CCTACGCAAC AACCGGCAGT TACTCTGTGA ACCTGACGGT GACGAACGTG
AGCGGGTCGA ACTCCTCGGT GAAGACGAAC TACATCAACG TCTCCGCCGT GCCCCTGCCG
GTTGCGAACT TCACGGCAAA CGTGACGACC GGTTTCGCTC CGCTGTCGGT GCAGTTCAAC
GACACTTCGC TGGGTACTAA CCTGACCGCC TGGTCGTGGT CGTTCGGCGA CGGCGCCACC
TCGACGGTGC AGAACCCGAT CAACAACTAC ACGACAGCCG GCAGCTACAC CGTGAACCTG
ACGGTGACGA ACGCGTCCGG CTCTAACACC ACCACGAAGA CGGACTACAT CATCGTCACC
GCCTCGGAAG CTCCGATAGC GAACTTCAGC GCGAACATCA CAAACGGCAC CGCCCCACTG
GCTGTGCAGT TCAACGACAC CTCGCTCGGT GTGAACCTGA CGGCATGGTC CTGGGCGTTC
GGCGACGGCA ACACATCGAC TGTGCAGAAC CCGATCTATA ACTACACCGC AGCCGGCAGT
TACACCGTGA ACCTGACGGT GACGAACGCG ACCGGGTCCG ACAACGAGGT GAAGACGAAC
TACATCAACG TCTCTGCATC GGTAACTCCG ACCCCGACGG TCACCGTGGG CCCCCTATCA
GCTGTTCGAC ATATCTTCAT CAACACCGCG AACGGCGTGA AGTACAACTA TGACGGTGCG
ACCTACGGCG GCCCGAACAA CACCTACTAT GTCAAGGCCG ACGGTGGCGG ACTGAACGAG
CTGCACCTCA CCAACGACGC GAATGTTGCC TCCGGCCAGG TCACGACGAC CGGTGCCCAG
AACGGCACCT TCTATGTGAC GAACACCGGC GGCCGTGGAT TCGATGACGA CATCATTCTC
CTCGTCTCGG TGAAGGGCCC GATCCCCGAC GACTTCGGCA TCCATCTGAC CTCGAACGGC
TACACCTGGA CACCGTCAGC CGCCGGAGTC TACAACCCGA CTGCCCCGAC CGATTCCTCC
TACGTGACCG GTATCGACCA GACCTTCTCG AAGGCCGACT TCATCTACGG CCCGCAGACC
TGGAAGCCCG GGCCCCACCA GGGATCGGCC GACCTGGTGA CCCCATACCT GCCGCTCTAC
ACCGGGCAGG ACATCAACGA CGCCTCGACG GCCCAGTACC TGATGTTCGT CGACCTCAAG
GCTGGGAACG TAAAGCAGGG CGTCATCCCC AGTGCCACGC TGAACAACGG TGCCCTGAAG
GTGGACTACA GTATCACCAA CCTGAGCACC CGTGCAGATT TCAATGGATT CGCCTGGGCC
AATGCCTCGA ATCAGGGGCA GGGGATCACC TGGACAAACA ATGTCTTTAA TCCGGGCGCC
AGCGGCTACT CGGTCACAGC CCCTGTGGCT GCCCCCGTCG CCGGCTTCAA TGCGAGCGTG
ACGAACGGCA CTGCACCGCT TGCGGTCCAG TTCAACGACC TGTCAACCGG TACCCCGACC
TCGTGGTCGT GGGACTTCGG TGATGGCAAT ACATCGACAA CGCAGAGCCC GAGCCACACC
TATACGGCGG CCGGGAACTA CACCGTGAAC CTGACGGCGA CCAATGCCGG CGGATCCAAC
ACCACGGTGA AGACGAACTA CATCACCGTC ACCGGGTCAG AAACCCCGAC GGCTCCGGTC
GCGAACTTCA ACGCGAACAT CACGAACGGC ACTGCCCCCC TGGCCGTGCA GTTCACCGAC
CTGTCGACCG GAGCTCCGGT GACCTGGTCG TGGTCCTTCG GTGACGGCAA CACATCGACG
GTGCAGAACC CGGCCTATAC CTACGCGGCG GCTGGGAACT ACACCGTGAA CCTGACGGCG
ACGAACGCCG GCGGTTCCAA CACCTTGGTG AAGACGAATT ATATCACCGT TACCTCACCG
GCGATTCCAA CACCTTCCCC GACGCCCACG ATCACCGTGG CCCCGCTCTC GGCCCCGAAG
CATATCTTCA TCAACACCGC GAACGGCGTG AAGTACAACC TGGACGGAGC GACCTATGGC
GGTCCGAACA ACACCTACTA CATCAAAGCC GAAGATCCCG GAATGAATGA GCTCCACCTC
ACCAACGACG TGAACGCACC CTACGGCCAG GTCACGACGA CCAGTGCCCA GAACGGCACC
TTCTATGTCT CGAACACCGG GGGGAGGGGA TTCGATAACG ACATCATCCT TCTCGTCTCG
GTGAAGGGCC CGATCCCCAA CGACTTCGGC ATCCATGTGA CCTCGAATGG ATATACCTGG
ACGCCGGCAG CCGCCGGAGT CTACAACCCG ACCGCCCCGA CCGACTACAC CTACGTGACC
GGTATCGACC AGACCTTCTC AAAGGCAGAC TTCATCTACG GACCACAGAC CTGGAAACCG
GGTCCCGGCG ACCTGGTGAC CCCATCGCTG CCCCTCTATT ACGGGCAGAA CATCAGCGAT
GCCTCGACGG CACAGTACCT GATGTTCATC GATCTCAAGG CCGGTAACAT GAAGCCCGGC
ACCTTCCCGG GTGCCACGCT CAACAACAAC GGAGCCATGA AGGTGGATTA CAGTTTCACC
AACATGAGCA CCCAGGCCGC CTTCAATGGG TACGCCTGGT GCAGTGCCTC GAACCAGGGA
CAGGGGATCA CCTGGACAAA CAATCCCATA AATTCGGGGG CCAGCGGCTA CGTGGTTACA
GCCGTGCCTC CGGCCCCGGT CGCCGGTTTC AGCGCTAGCG TGACGAACGG CACTGCCCCA
CTGGCCGTGC AGTTCAACGA CCAGTCGACG GGCACTCCGG CCTCGTGGTC GTGGGACTTC
GGTGACGGCA CCACCTCGAC CGTGCAGAAC CCGAGCCACA CCTATACCGT GGCTGGAAAC
TACACGGTGA ACCTGACGGC GACCAACGCT GGCGGGAGTA ACACCATCAC AAAGACGAAC
TACATCACCG TCACCGGGTC CGAGAGCCCG TCGGCTCCGG TCGCGAACTT CAACACGAAC
ATCACGAACG GCACCGCCCC ACTGGCCGTG CAGTTCACCG ACCTGTCGAC CGGAGCTCCG
GTGACCTGGT CGTGGAACTT CGGTGACGGC AACACCTCGA CGATGCAGAA CCCGGTTCAC
ACCTACGCGG CAGCCGGGAA CTACACGGTG AACCTGACAG CGACGAATGC CGGCGGGTCC
AACACCACGG TGAGGACGAA CTACATCACC GTCCACGCTG TGGTGCCGCC GACAACAGAA
CCAACGACGA CCGCACCGAC AACAGCACCG ACCACCACCG CTCCAACAAC CGTACCGACA
ACCATTCCAA CGACGATAGC AACAACCATT CCAACGACAG TACCAACAAA GATCCCGACG
ACAGTTCCGA CGACGATCCC GGTGACCCCG ACTCCGACCA TGCAGCCGGT GACGGCTAAC
TTCACGGCGA ACGTGACGAC CGGCCAGACC CCACTGGCTG TGCAGTTCAC CGACCTGTCG
ACCGGTACGA TCAGCCAGTA CTTCTGGCAG TTCGGTGACG GCGGTGCCTC GTTCGATAAG
AACCCGGTCC ACACCTACTC GGCAGCCGGC ACCTACACCG TCTCCCTCGT CGCCATCGGT
TCCACCGGGG CTGAGGTGAA GACGATCCCA CAGTACATCA CCGTCACCGG TCCAGGGACT
CCGACAGTCT CGCCGACCGC GACGACACCA ACTCCAACCG GAACAACCGT CACTCCAACC
GTGACGTTGA CGACCGCAAC GACGACCGTG ACCCCGCTGC CGACCTCGTC CGGGCATGAC
CTGCCGATCG CGAACTTCGT GGTCACCTAC CAGGCCGGAG CAGGTTCGAT GGGCATCCAG
GTCACCGACG CCACGACGAA CGCCACCACC GTGAAGTACG ACCTCGGCGA CGGTACCACC
ACCGCCTATA AGAACTTCAA GTACACCTAC TGGCAGCCCG GCACCTACAC GATCACCCTG
ATCGCGACCA ACGACGCCGG GTCTTCGACG AAGACCGTCA CGGTGACCGT GCCGGCCGGG
TCACCCACGA CCACGACCGT TTCACCAACG ACGATGACTG TGACGCCAAC CCAGACACCC
GTAAACCCGA ACCTGCCGGT GGCCAACTTC ACGATCACAT TCCAGGGAGG CTCGGGCTCG
ATGGGCATCC AGGTCACCAA CACCGCAGTG AATGCGACCT CGGTCCATTA TAACCTCGGC
GACGGGACGA CCACTGCCTA TCCGAACTTC ACCTACACCT ACTGGCAGCC CGGCAACTAC
ACGATCAACC AGACCGCAAC CAACGCGGCC GGGTCCACCA CCAGGACCAT CAATGTGACC
GTGCCGGCGG TGGCAACCCC AACGACAATC CCAACCACCA CCGTCTCGCC GACCGTGACC
GGAACAGCTC CGGTTTACAA CGGCACCCAT GCGATCCCCG GTCAGCTACA GGCCGAGGAC
TACGACCTCG GCGGCGAGGG CGTCGCCTAC CACGACACCA CACCCGGCAA CGAGGGCGGG
GTCTACCGGC ATGACGATGT GGACATCGAA CAGATCGATA CCGACAGAAG TCCGAGCGTC
GGCTGGACCC GTGCTGGCGA ATGGCTCGCC TACACCGTGA ACATCAACAC GGCCGGCACC
TACACCGCCG GGTTCCGGGT CGCCTCGGCC CATGCCGGCT CGTCCGTCCA GATGTATCTC
GACGACGGCG CGACACCTCT CGCCGTGGTG AACGTCCCGA ACACCGGCAA CGATGCGGCC
TTCCAGACCC TCCAGGTCCT GGTGACCCTG CCGGCCGGGC AGCACCGGCT GAAGCTTGCG
TTCCCGGGGA ACTACGCCAA CATCAACTGG ATCAACTTCG CCTGA
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| Protein sequence | MIRYRKPGEF LLLMIIMIAA LATPALAGLV LPNDTGTGAS INQQTLSLPL SFIENQGQSP
DVVKYQVNAA GHSIAFEPDR IVLAASQDVN NTTKSAEVTM TFPGSSASPA IAGLDRLPGN
ASFFLGNDSS RWQSDVPTYR SVEYQQLYPG IDLRYNGTQG VLKREFVVAP GTSPDQIAIA
YDGIDGLAIA ENGSLAITTS LGVLTDEAPV AYQAIDGIKV PVTSSYRLKD DGTVGFTVGA
YDQSRPLVID PTLLYSSYFG GSNQDFITRV RLDSAGNIYL AGLTSSADFT IQNSNQAPGG
SNDAFVTKLN PEGTAVLYSS YLGGSGDDVV RGMSIDGSGN IYLAGVTAST DFPLQSPFQL
TNNEGKAGFV TKLNPSNPAG SQLVYSTYID GNTGNGVSTG ANGIVADPSG GAYVAGVSNS
PTLPVTADAA QPALSGTYDA YLARIGSDGS LMYLTYLGGA KDEGGSNYVS TAGSTPGIMG
IGLDSAGNVY VSGSTKSTDF PTLNPYQSVH GGTTTVTDAF VAKYTATGSK VYATYLGGTT
SDVAYDLAVD PAGAVYVTGN TGSTNFPLVN PAQSAMKGTS TAFITKIDPS GTSLDYSTYW
GGSSGTNTPY SIAVDGAGDA YVAGATLSTD YPIINGAQSA FSGRTDGFVV KFGPAGNALY
STVIGGNGEN CNNFFYGIGV NDQGDAVVGG STSSNYPTTA SAIQQTNRDT LPGYCGIFSI
LTDKAVADFT ATPTTGYAPL SVQFNDTSKG SPTNWSWDFG DNATSTEQNA THTYTAAGLY
SVNLTASNSL GSTHLQKTDY ITVLDRPGLP EANFTANVTN GTAPLAVQFN DTSLGGNLTA
WSWVFGDGAT STEQNPVHTY AAGGNYTVNL TVTNSGGSNS TEKVDYISVA RQPLPEANFT
ANVTTGIAPL SVQFNDTSLG ANLTAWSWAF GDGNISTEQN PIHTYATTGS YSVNLTVTNV
SGSNSSVKTN YINVSAVPLP VANFTANVTT GFAPLSVQFN DTSLGTNLTA WSWSFGDGAT
STVQNPINNY TTAGSYTVNL TVTNASGSNT TTKTDYIIVT ASEAPIANFS ANITNGTAPL
AVQFNDTSLG VNLTAWSWAF GDGNTSTVQN PIYNYTAAGS YTVNLTVTNA TGSDNEVKTN
YINVSASVTP TPTVTVGPLS AVRHIFINTA NGVKYNYDGA TYGGPNNTYY VKADGGGLNE
LHLTNDANVA SGQVTTTGAQ NGTFYVTNTG GRGFDDDIIL LVSVKGPIPD DFGIHLTSNG
YTWTPSAAGV YNPTAPTDSS YVTGIDQTFS KADFIYGPQT WKPGPHQGSA DLVTPYLPLY
TGQDINDAST AQYLMFVDLK AGNVKQGVIP SATLNNGALK VDYSITNLST RADFNGFAWA
NASNQGQGIT WTNNVFNPGA SGYSVTAPVA APVAGFNASV TNGTAPLAVQ FNDLSTGTPT
SWSWDFGDGN TSTTQSPSHT YTAAGNYTVN LTATNAGGSN TTVKTNYITV TGSETPTAPV
ANFNANITNG TAPLAVQFTD LSTGAPVTWS WSFGDGNTST VQNPAYTYAA AGNYTVNLTA
TNAGGSNTLV KTNYITVTSP AIPTPSPTPT ITVAPLSAPK HIFINTANGV KYNLDGATYG
GPNNTYYIKA EDPGMNELHL TNDVNAPYGQ VTTTSAQNGT FYVSNTGGRG FDNDIILLVS
VKGPIPNDFG IHVTSNGYTW TPAAAGVYNP TAPTDYTYVT GIDQTFSKAD FIYGPQTWKP
GPGDLVTPSL PLYYGQNISD ASTAQYLMFI DLKAGNMKPG TFPGATLNNN GAMKVDYSFT
NMSTQAAFNG YAWCSASNQG QGITWTNNPI NSGASGYVVT AVPPAPVAGF SASVTNGTAP
LAVQFNDQST GTPASWSWDF GDGTTSTVQN PSHTYTVAGN YTVNLTATNA GGSNTITKTN
YITVTGSESP SAPVANFNTN ITNGTAPLAV QFTDLSTGAP VTWSWNFGDG NTSTMQNPVH
TYAAAGNYTV NLTATNAGGS NTTVRTNYIT VHAVVPPTTE PTTTAPTTAP TTTAPTTVPT
TIPTTIATTI PTTVPTKIPT TVPTTIPVTP TPTMQPVTAN FTANVTTGQT PLAVQFTDLS
TGTISQYFWQ FGDGGASFDK NPVHTYSAAG TYTVSLVAIG STGAEVKTIP QYITVTGPGT
PTVSPTATTP TPTGTTVTPT VTLTTATTTV TPLPTSSGHD LPIANFVVTY QAGAGSMGIQ
VTDATTNATT VKYDLGDGTT TAYKNFKYTY WQPGTYTITL IATNDAGSST KTVTVTVPAG
SPTTTTVSPT TMTVTPTQTP VNPNLPVANF TITFQGGSGS MGIQVTNTAV NATSVHYNLG
DGTTTAYPNF TYTYWQPGNY TINQTATNAA GSTTRTINVT VPAVATPTTI PTTTVSPTVT
GTAPVYNGTH AIPGQLQAED YDLGGEGVAY HDTTPGNEGG VYRHDDVDIE QIDTDRSPSV
GWTRAGEWLA YTVNINTAGT YTAGFRVASA HAGSSVQMYL DDGATPLAVV NVPNTGNDAA
FQTLQVLVTL PAGQHRLKLA FPGNYANINW INFA
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