| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1782 |
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| Symbol | |
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| ID | 7270328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1863085 |
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| End bp | 1864488 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570398 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002466812 |
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| Protein GI | 219852380 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCTG AATCCGGGTC CGGATGGGAT GGTGAAACAG CGTACCAGAG TGGTGGTGCA
GAACTTAGGA TCACCAGTAC ATCGGCTGAG ATAGCCCCGT TTGCAGAACT GGCAACCGCC
GCCACCCCTG AAGGGTGGTG CAGGCAGGGG ATGGCCGCCT ATACGACAGG TGCCTATGAG
GAGGCGGTGG ACTGTTACAA CCATGCCATC GAGGAAGATG CAGTACCGCA TCATGCCTGG
TTTGAACTGG GTGCGGCCCT CTACAATCTC GGCAGGTACC AGGAGGCCGT CGAAGCTTAC
GACCAGTACC TGGACCTGTC CGGTGATGAC GCAGACGGCT GGTATAACCG CGGTCTCTGC
CTTGGCATGG CCGGACAGCA CGAGGAGGCG CTCCTCTGCT TCAATGAGGT GCTGACCATC
GAACCGACCG ATACCGCTGC CCTCTATGCT GGTGCCGAAT GTCTCGAACG GACAGGGGAA
CTTTCAGAGG CAGTGCTCTG GTATCAGGAA CTGCACACAC TTGCTCCTGA TGAAGAGAAT
GCCTGGCTCC GGGAAGGCTA CGATCTGATC CGGCTGAAAC AGGTTGATCT GGCTGTTGCA
TGCTTCGATC ATCTCCTCTC TTCCGATGGC GGGAACCAGA GAGCCCTGCT GGCGAAGGCG
TTCTGTCTGG CTGAACGCGG AGATCCGGAT CAGGCGTTCT TGGTCTACGA CCAGATTCTG
TTGACCGATC CCGACTGTGA AGAGGCCTGG CTGGAGAAAG GGACACTCTG CAAGAAGACA
GGGAATCATC AGGAGGCTCT TCGATGCATC GAGATGGTCC TCGAGGAGCA TCCGGAGAAC
GAACGGGCCC TCATGGAGCG TGGCCATCTC CTCCGTCTTT GCGGGACGTA TCCAGAAGCG
ATCAGGTGTT ACCGGGAGGT GACAGCCCGC TCTCCAGAAA ATACCGAGGC ATGGTACCTG
ACCGGGCACT GCTATGCATC CCTTGAAAAG AATCTGGAGG CGATCGACTG CTTCGACCAG
GTGTTGAAGT TTGGGGATGT CGGCACACGG GGATACGTGG GGAAGGCCCG CTGTCTGATC
AGTATGGGCC GGTTCGTTGA CGCACTCGCC TGTTACGAGC AGATGATCGA GGCGGATCCG
CTGGACGAGA CGGCGTTCTA CCAGAAAGGA ATCTGTCTTG TCGCGCTCGA ACGTGAAAAA
GAAGCACTCG AATGCTTCAA CGAAGCTCTC GAACTCGAGC CGCTCTATGA GCGAGCGAAG
ATCGAACGGG ACAAGATCCT CGGGAAGATC GGCTGCTTTG AAGAGGAGCC CTGTTGCTAT
TCCGAGTACG ATCTGGATGA GGATCTCCCC AACCAGGATG AAGAATCGTA TGGAGACTAC
GGGTTCAGCG ATTACGAGGA CTGA
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| Protein sequence | MTPESGSGWD GETAYQSGGA ELRITSTSAE IAPFAELATA ATPEGWCRQG MAAYTTGAYE
EAVDCYNHAI EEDAVPHHAW FELGAALYNL GRYQEAVEAY DQYLDLSGDD ADGWYNRGLC
LGMAGQHEEA LLCFNEVLTI EPTDTAALYA GAECLERTGE LSEAVLWYQE LHTLAPDEEN
AWLREGYDLI RLKQVDLAVA CFDHLLSSDG GNQRALLAKA FCLAERGDPD QAFLVYDQIL
LTDPDCEEAW LEKGTLCKKT GNHQEALRCI EMVLEEHPEN ERALMERGHL LRLCGTYPEA
IRCYREVTAR SPENTEAWYL TGHCYASLEK NLEAIDCFDQ VLKFGDVGTR GYVGKARCLI
SMGRFVDALA CYEQMIEADP LDETAFYQKG ICLVALEREK EALECFNEAL ELEPLYERAK
IERDKILGKI GCFEEEPCCY SEYDLDEDLP NQDEESYGDY GFSDYED
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