Gene Mpal_1776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1776 
Symbol 
ID7270322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1856595 
End bp1858202 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content50% 
IMG OID643570392 
Productsignal transduction histidine kinase 
Protein accessionYP_002466806 
Protein GI219852374 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGG TAAAACAGAA CCTGGCATCC ATCAAGGAAG TCCTGAAGAA GAACCCGCGG 
GGACTTTCCA TAACTGATAT CTCACGGGAA CTGAGCCTGA ACAGGAATTC CGTGGCAAAA
TATGTCAATA TGTTGATGGT CTCAGGCGAC ATTGAAATGA GATCCTTCGC TGCGGCGAAG
GTATATTTTC TATCAGATCG GGTACCGATC TCAACGATGC TCGATTACGC ATCAGATATG
ATCGTCGTGC TCAACAGTGA ACTGAAGATC CTGCAGGCAA ACGACAACTT TCTGACCTTC
ACTGGAAAGA AGCCGCAACA ACTGCAAGGT CGCTCCCTCA GTTCCCTCAA TCTGACCATT
CTCAAGGAGA CACCATTGCT CAACTGGATC GTCAATGCTC TGCATGGAAT GTCATACAGC
GATGAGATCG AATGGAAGAT TGACGAACGA TCCATCTCAT TTCAGATTAA ACTGATCCCA
ACGGTCTTTG AGAATGGCGG CGCAGGGGTG ACTCTGGTCT TCGAGGACAT CACCGAGAAG
AAAGAGGCGG TGGCGGCTCT AAAGCAGAGT GAAGCACGCT ATCGGGCCAT CGTCGAGGAG
CAGACAGATC TGATCTGCAG GTTTCTTCCA GACGGCACGC TGACATTTGC AAATAATGCC
TACTGCACCT TCTTCAATAT GGCAAAAGAG GAATTGATCG GGCATTCCTT CAAACCGATA
ATTCAGAACA GCGAGCAGAG GAGATTGAAC CAGTTCGTCG ATGACATCAC ACAGGAATGT
CCGGTGTTGA CACTTGATGA ACAGGTGATC CGTCCAGATG GTGAGGAGGT TTGGCTTCAG
TGGACCAATC GGGCGTTATT CGATGATTCA GGGAACATGG TCGAGTACCA GGCCGTCGGA
AGGGAGATCA CAGAACTGAA ACATACCGAA GAACAGCTCA AGCAGGCCCT GAAAGAGAAG
GAAGATCTGA TAGAATCGGT GGGAAACCGG ACACGAGGAA TGTTTCAACT TATCCAGAGC
CTCTTCGATC TTCAGAAACA GTACTGTACC ATTGCTACCG ATCTCGGAAT CATCAGAGAA
TCCCAGAACA GAATCGCCGC CCTAGCCCTG ATCCATGAAG TGCTTGAGGA GTCTGCCGAT
CCCGAGCATA TCCCGATCAG AGACTATACA CAACGACTGG TCGAACTGAT CTTCTCCACA
TATATTCACG ATACAGAACA GGTGACAGTC GATCAGAAGA TCGAAGATGG ACTGATCCAG
ACCGATATTG CCGTTCCCTA CGGTCTGATC CTCACCGAAC TGCTGACCAA TTCATTTCTC
TGGGGATTCC CGGAGGGAAG GCGAGGAACC ATGACGATCG AGGTGGCCTG TCAGGACAGG
TCGACCATCC TGACCATCAG CGACGATGGC GTGGGCATCC CAGACGATCT CGATCCTGCC
AGGTCGGATA CGTTCGGACT CGACCTGGTA TATGCCCTGA CTAGACAACT GGGTGGAACC
CTTGATCTAC AGAGGAAGAA CGGTACCTCA TTCAGGATCA CCATCCCAGA CCCGGTCAGG
AATCACGACC AGAATATCCC TCCCCAGATC TCAATCAGAT CATTTTAA
 
Protein sequence
MISVKQNLAS IKEVLKKNPR GLSITDISRE LSLNRNSVAK YVNMLMVSGD IEMRSFAAAK 
VYFLSDRVPI STMLDYASDM IVVLNSELKI LQANDNFLTF TGKKPQQLQG RSLSSLNLTI
LKETPLLNWI VNALHGMSYS DEIEWKIDER SISFQIKLIP TVFENGGAGV TLVFEDITEK
KEAVAALKQS EARYRAIVEE QTDLICRFLP DGTLTFANNA YCTFFNMAKE ELIGHSFKPI
IQNSEQRRLN QFVDDITQEC PVLTLDEQVI RPDGEEVWLQ WTNRALFDDS GNMVEYQAVG
REITELKHTE EQLKQALKEK EDLIESVGNR TRGMFQLIQS LFDLQKQYCT IATDLGIIRE
SQNRIAALAL IHEVLEESAD PEHIPIRDYT QRLVELIFST YIHDTEQVTV DQKIEDGLIQ
TDIAVPYGLI LTELLTNSFL WGFPEGRRGT MTIEVACQDR STILTISDDG VGIPDDLDPA
RSDTFGLDLV YALTRQLGGT LDLQRKNGTS FRITIPDPVR NHDQNIPPQI SIRSF