| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1768 |
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| Symbol | |
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| ID | 7270314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1840491 |
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| End bp | 1843214 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570384 |
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| Product | CheW protein |
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| Protein accession | YP_002466798 |
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| Protein GI | 219852366 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.52563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC GACCAGGCAG AAGAGCATTG TTCGCTGGAA CCTCGGCACA GAAGAGGACG
GCGATACCGG CCCCTGTGGG GGAGGCAGTG GCAGAAAGAG CCGAAGTACG GGGCCCTGAT
CCCAGTGTAG AGCGATTGAT CAGCACGGTC ACCAGCGCAT TGACTGAAGC GTTATCCGGT
GCCAGGTCGA CGGAGGTGCA CCCTGCCGAT CTGGATATCA AATATACTCC GCTTGTCGAA
GCGGTCAATG CAGCGGTCTT CCGGCTCACC GAGACGCCCC CTCCCTCTCA TGTGTCGGAA
CCGGGTCCTG ACCCTGCACT GCTCAAAGAG AAAGAGGCAG AGATCGAGGA TCTGCAGCAG
CGGATCGCAG CGATCATCCA GCAGCACCCC TTGCCGGTGC TCTTTGTCTC CCCTGACCTG
TCGATCATCG AGGCGAATAG TGCGTTCTGT CAGATGAGCG GACTGCTGCG ATCGCAGTTG
ATCCGGCATC AGATCTCGGT CATTGCTGAG CGTGAGCGGC AGGGTGACGG CCTGGCCACG
GCCATCCGCC AGCGTTTGCC TGTGGAGGCG GAGATCACCG TCGACCTGCC AGCTGGGACC
AAAATGTTGA AACAGTACGC GGTTCCGATC CTCGATCGGT TCGGGGCTGT GGAGGCTCTG
CAGGTGATCT TTACGGATCA GACCGCTCTG AAACAGGAGG AGAAAGCCCG GATATCTCTG
TCAGAGGAGA TTGAACGGCA ACAACTGCAG AACAAGAATC TGGTGGACGG TCTTCCGACG
CCGGTGATGA TCATCGACGG AGCAGATGCA ATACTCGATG TCAATCCTGC GTTCTGTGAG
ATGAGCGGGT ACAGCCGGGA GCATCTACTG ACGGTCCGGC TGAACGAGTA TGCAAACCTC
ACTGCACTCA CGGCAGGAGC GTTTCTCTCC TCAGATCAGC GTCGAATCTC TCGTGAGATC
TCGGTGGAGT TTCCAACCGG CCTCCATCTT CTCAGAGAGG ATCTGGTCCT GCTCACCGAA
CAGCCTGGCG AAGGCCTTCC CAGGGGGATG ATCATCCTCT GTGCCCTCGA GGACATCTCT
TCAGAGAGAG CGGACGAGCA CCAGGTGAGT GAACTCTCCA GCACCGTTCT GCAGCAGAAA
CGGCTGATCG ATACCCTGAT GCGCGAGACG CCCGTCCCGA TTCTGCTCCT CGACCCCGAG
GCGGTCATCG TCTCTGCCAA TGATGCCTTT GTCACGATGA GTGGATACAC GCTGGAAAAT
CTTCTCGGTA TGCCGATCTC TGCCTTTTCC CTCCTTGCAG AGACTGGACT CCCGGTTGAG
GAGATCATGC AGCAGAGCGA AGGGGCCTTT GGGGAAGTGA AGATGGAGTT CGTCAGCGGA
ATCCACGACC TTGAGCGTTA CTGCTTCCCC CTCCGCGACG ACCAGGGAAC ATTGACCAAC
CTGCTGGTCT TCTTCGATGA TCAGACGCAT GAAAAAACCC AGGAAAAGAC GATCCTGACA
CTCGAAGAGG AGGCATCGAG TCGCGATCTT CTCATCGATC AGAGTGTTGA GGATCTGGGA
CTGGGAATCT CCCGTCTGGC AGATGGGGAC TTTACCTCTC ATTTGAAGAT CGATGAAGGC
GATCCCTTCG GTTCGATCAA AGGGGTGTTC AACACTGCTG TCGACCGGGT TCGTGCAGTG
ATCGAAGACT ACGAACAGAC GGCCGACCGG CAACAGGTTC AGAACCAGGT ACCGGAGACT
GCGGGACCCT CAGATGCGGA GCAGACCCTG ATCGATACGA TCGAAACGAT AAAGCAAGAT
CAGGTGAAGA GCGCTGACCG GCTGCAGGAG AGCAGCGCCG GGGTTGTGCT GGGTCTTTCA
CTGCTCGGGA CAGATGGGTT CACTTCCCTC CAGGTTCAGG ATCAGGACCC GCTCTCTGAG
GTGCGGAGAG CCGTGAACAG TGCAGGTATC CGGCTCGCAC CGGTCCAGTC ACCAGTTCCA
GCACCTGCTC TTCCCACAAT TGATTATGGG GTTTTGGCAG TACAGCATGA GCCGGTACCG
GTTGAGGCAG CACCTGTTGA GACGGAACTT CCTGAAACGC TGGTTCCCCC CGTTAAGGAT
GAGGATCTGG TACCTGAACC AGTATCATCA GTGCCGGCAG CTGTTCTACC AGATCTGAAG
ATCGTCAGTC CTTTGCAGGA GCAGAGGATG CCCACAAAGA TAGAGGAACA GAGATCTATG
GCTACAGAAC AGAATCGAGA GGAAAAACAG GCCTCAACCA CGATGGTGGA TGTGGTGGCA
TTTGAAATGG CTGGTCAGCG GTATGCACTT GATATACAGC TGGCACGCGA GATCGTTGAG
ATGATTCCGA TCACCCCGAT CCCCCGTTCT CCTCCATATA TCTCAGGCAT CATCAACCTC
CGGGGCGAGA TCACCAATAT TTTGAACCTG TATACACTGC TGGGACTCCC TGAGCAGGAG
GTCAATCAGA ACCAGAAGAT CATCGTTCTC GTCCCTGATG CTGCAGAAGG GATCAATGTC
GGTATCATCG TCGACAATGT CCAGAGCGTT ACCCAGGTGC CGGTGACTGA TATCGAGCAG
ATCAAGGATG ATGCCTCATC CGACCTCTCC GGGTTTGTAA AAGGGATCAT CAAGGCAAAG
GGTGACGATG CAGAGGGGAA GACAACCGAC CTGATCATCT GGATCGATAT GCTGAAGGTG
CTGAGCCGGC TGGTAAACCA GTAG
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| Protein sequence | MAERPGRRAL FAGTSAQKRT AIPAPVGEAV AERAEVRGPD PSVERLISTV TSALTEALSG
ARSTEVHPAD LDIKYTPLVE AVNAAVFRLT ETPPPSHVSE PGPDPALLKE KEAEIEDLQQ
RIAAIIQQHP LPVLFVSPDL SIIEANSAFC QMSGLLRSQL IRHQISVIAE RERQGDGLAT
AIRQRLPVEA EITVDLPAGT KMLKQYAVPI LDRFGAVEAL QVIFTDQTAL KQEEKARISL
SEEIERQQLQ NKNLVDGLPT PVMIIDGADA ILDVNPAFCE MSGYSREHLL TVRLNEYANL
TALTAGAFLS SDQRRISREI SVEFPTGLHL LREDLVLLTE QPGEGLPRGM IILCALEDIS
SERADEHQVS ELSSTVLQQK RLIDTLMRET PVPILLLDPE AVIVSANDAF VTMSGYTLEN
LLGMPISAFS LLAETGLPVE EIMQQSEGAF GEVKMEFVSG IHDLERYCFP LRDDQGTLTN
LLVFFDDQTH EKTQEKTILT LEEEASSRDL LIDQSVEDLG LGISRLADGD FTSHLKIDEG
DPFGSIKGVF NTAVDRVRAV IEDYEQTADR QQVQNQVPET AGPSDAEQTL IDTIETIKQD
QVKSADRLQE SSAGVVLGLS LLGTDGFTSL QVQDQDPLSE VRRAVNSAGI RLAPVQSPVP
APALPTIDYG VLAVQHEPVP VEAAPVETEL PETLVPPVKD EDLVPEPVSS VPAAVLPDLK
IVSPLQEQRM PTKIEEQRSM ATEQNREEKQ ASTTMVDVVA FEMAGQRYAL DIQLAREIVE
MIPITPIPRS PPYISGIINL RGEITNILNL YTLLGLPEQE VNQNQKIIVL VPDAAEGINV
GIIVDNVQSV TQVPVTDIEQ IKDDASSDLS GFVKGIIKAK GDDAEGKTTD LIIWIDMLKV
LSRLVNQ
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