Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1686 |
Symbol | |
ID | 7271249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1745866 |
End bp | 1749036 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643570302 |
Product | periplasmic copper-binding |
Protein accession | YP_002466718 |
Protein GI | 219852286 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.482609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATT CCCTCCTGTT ATCAGGCACC ATCATTCTCC TGTTCTGCCT GATCATAATC CCAACAGAAG CGCTCGTCCA GTCTGAATCT GCAGTACGGC CGACTATGTT CGCCTGGGAG GAGAAGATGA GTTCTGATCT CCTGCCCCTG GTCGATGAGC GGTTTCTTTC ACCAGGAGAG ACTCAGGGGG AGGCCGCAAA GGGAACAGTT CGACAGACTG GAATCAATGG GACTCTCAAC GATGAGGTCT TCATCTATAT CAGGGTTACA GAGACCATAT CAGTAAAGGA TCTCGATCGC TGGTGCGTCG AGATCACTGA CCGCGATGAT GGGGAGCATC GTGTGGCAGC CTGGGTCAGA GTCAGTGACC TTCCCAGTCT CGCCTCATTG GAATGGATCA GGTCAATCCA GACAGTACTT CCACCAATTG TCAATACCGG CTCAGTAGAC ACACAGGGAG ATCAGATTAT CAGGGCAGAT CAGATCCGGA GAACCACGGG GTCCTCGGGC CAGGGTGTAA AGGTCGGTGT GATCTCCACA GGAGTTGACC ACTGGCGAGA CGCTGCAGCA ACCGGAGACC TGCCCTCGAC CCTCCACGTT CTCTCAAACT CATTTGGCGG TGATGAGGGA ACGGCCATGC TTGAGATCAT TCATGACATT GCACCAGATG CTGACCTATA TTTCTATGAT ACCGGTACAA ACACAATCGC GTTCAATCGA GCTGTGGACG CATTGACAGA GGCCGGCTGT TCGGTGATCG TCGACGACAT CTCCTGGTTG GGTGAACCAT TCTTTGAAGA CGGTTCGGTC GCGACACATA TCCAGGAGAA GATCCAGAAT GGGAACCTCG TTTATGTCAC CTCTGCCGGC AACTACGCAC AGAAACATTA TCAGGGGACC TATTTCAATG ACGGAAGCGG GTGGCATGAC TTCAGTGCAG GAAGTTCATC CAGAAAAAAG ATCTACCTGA GCATCCCGCC AGGCGGAAGC GTCAGAGCTG TTCTACAGTG GGATGATCCC TTCGGCACTT CAGCGAACGA CTACGATCTG TACCTGAACG AACAATATCC ATATTCTGGA ATCACCTTAA AAAAAAGCAC GAATGCCCAG ACCGGAAGCG CGGACCCGAT TGAGTGGATC ACCTATACCA ACAGCAACTC CTACACGATC AACGCCGAGC TCGACGTCAA CAACTACATG AACCTCGCGG AGGAACGAAC CCTTGAACTA CAGATGTACA TCAGTTCGGG AACCACGATC AGTCCAGATA ATCTGGTCTC TGCTGATTCT ATCAGTGGTC AGGCTGCTGT ACCCGAGGTC CTGACCATTG GTGCACTTGG CGCAACCACA CCCAATCAAC TGGAACCGTT CTCCTCCCAA GGCCCTGTCA CGATCGTATA TCCACACCGC GAGACACGTC AGAAGCCCGA TCTATGCGGG ATCGATGGGG TCGCCGTGAC CGGGGCGGGA GGGTTTCCCA CTCGGTTCTA TGGGACCAGT GCCGCAGCTC CGCATATCGC AGGGGTTGCA GCACTTCTCT GGAGTCTGAA CCCATCCCTC ACTCCTGACC AGATCCGAAC AGTGCTTATT GAAGGCGCGG TCGACCTTGG TGATCCTGGA TGGGACACGC TCTATGGATC TGGCCGAGCC GACGCACTTG CCTCAAAGGA TTTGATCAGA ACTGATGGGA AGATCACGGT ATCGGGGCCG GTAGTGATCG ATAAACCAGG CACCTATGTA CTCGACCGTG ACATCATAGA TTGCCAGAAT ACGGTAGGAA TTGAGATAAA GGCGTCAAAT GTCGTCTTCG ACGGTCAGGG TCATCTGATC AGCGGACAGA ATAGAGGTGG ATCGGCAGGG ATCTTTGTCT CGAAGGATCC AGATAATCCA CTGACTGGCG TTATCATAAA AAATGTGGAT GTGGACCACT GGGACTATGG GATCTATTAC CTGAATGCTA TCGAGGGAAT GATCCAGACG ATCAGAACTA CAGGGAATGA TAAATATGGG ATTGTTCTCT ACGCGGGGAG CAGTGGGAAT ACAGTCGCTG ACAGCACGCT CACCGATAAT GGAGACGGTA TCTACCTAAC CGCCTCAAGC GACAGGAATA CAATCCAAAA CACGTCGATC AGAGAGAACC GGAACCATGG AATCTCTATC TATGACTCAA CCAGCAACCT ACTGGAGGGT AACAGCATCA CTGGCGCAAC CGCAGTTGGG GTCCAGTTCT TCACCACGAA TAACAACACC CTGACCAGCA GCACGATTAC CGGGGACACC CTGTATGGTG TCCAGATTTA CCATTCTGAT GGCAACATTC TGAAGAATAA CACCATCACC GGCAGCACCA GTGCCGGAGT ATACCTCAAC CAATCCCAGG AGAACAGTAT CTACAACAAT TACTTCAACA ATCCAAATAA TGCCCTTGTT GAAGGAACGA CGAGCCAAAA CACCTGGAAC CACGATCCAA TGCTTGGAAC CAACATCGTC AGAGGTCCAT CGATTGGAGG AAATTATTGG GCGACTCCAT CGAGAAATGG TTTTTCAGAG ACTCATCCGG ACAACAACCG TGATGGGTTC TGTGACGAGG GATATATCAT CACATCTGAA CAGAAGGGAA AAAACATCGA CGAGGCCCCC CTCATATTAC CGCAATCGTC CAATATGACC AGACCGACCG CAGGTTTTTG GGCAATCCCA ACCAAGGGGA CTGCCCCGCT CTCTGTCCAG TTCACTGACA CCTCAACTGG TATCCCAGCA CGGTGGACCT GGGACTTCGG AGATGGTCAG AATTCAACAG ATCAAATGAC AGAGGTTGTT AACAGGACAA TACAGAACCC GGTACATTCC TATACACAAC CAGGTACCTA CTCTGTCACC CTGACTGTCT CAAATCCACT GGGTGACGAC TCTATGGAAA GAACCGGATA TATCATCGTC TCTGGATCAG TCATTCCAAT ACAATCTACG AACGTAATTC CAAAAGATCT GAACGGCGAC GGGAAGTACG AAGATCTCAA CGGGAATGGT AGACCTGACT TTGAAGACGT GGTGCTGTTC TTCGATCAGA TGGACTGGAT TGAACAATAT GAACCAATCG ATGCGTTTGA CTTCAACAAT AACAATGCGA TCGACTTCAA CGACATCGTC GTCCTCTTCA ACCAGTTATG A
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Protein sequence | MRHSLLLSGT IILLFCLIII PTEALVQSES AVRPTMFAWE EKMSSDLLPL VDERFLSPGE TQGEAAKGTV RQTGINGTLN DEVFIYIRVT ETISVKDLDR WCVEITDRDD GEHRVAAWVR VSDLPSLASL EWIRSIQTVL PPIVNTGSVD TQGDQIIRAD QIRRTTGSSG QGVKVGVIST GVDHWRDAAA TGDLPSTLHV LSNSFGGDEG TAMLEIIHDI APDADLYFYD TGTNTIAFNR AVDALTEAGC SVIVDDISWL GEPFFEDGSV ATHIQEKIQN GNLVYVTSAG NYAQKHYQGT YFNDGSGWHD FSAGSSSRKK IYLSIPPGGS VRAVLQWDDP FGTSANDYDL YLNEQYPYSG ITLKKSTNAQ TGSADPIEWI TYTNSNSYTI NAELDVNNYM NLAEERTLEL QMYISSGTTI SPDNLVSADS ISGQAAVPEV LTIGALGATT PNQLEPFSSQ GPVTIVYPHR ETRQKPDLCG IDGVAVTGAG GFPTRFYGTS AAAPHIAGVA ALLWSLNPSL TPDQIRTVLI EGAVDLGDPG WDTLYGSGRA DALASKDLIR TDGKITVSGP VVIDKPGTYV LDRDIIDCQN TVGIEIKASN VVFDGQGHLI SGQNRGGSAG IFVSKDPDNP LTGVIIKNVD VDHWDYGIYY LNAIEGMIQT IRTTGNDKYG IVLYAGSSGN TVADSTLTDN GDGIYLTASS DRNTIQNTSI RENRNHGISI YDSTSNLLEG NSITGATAVG VQFFTTNNNT LTSSTITGDT LYGVQIYHSD GNILKNNTIT GSTSAGVYLN QSQENSIYNN YFNNPNNALV EGTTSQNTWN HDPMLGTNIV RGPSIGGNYW ATPSRNGFSE THPDNNRDGF CDEGYIITSE QKGKNIDEAP LILPQSSNMT RPTAGFWAIP TKGTAPLSVQ FTDTSTGIPA RWTWDFGDGQ NSTDQMTEVV NRTIQNPVHS YTQPGTYSVT LTVSNPLGDD SMERTGYIIV SGSVIPIQST NVIPKDLNGD GKYEDLNGNG RPDFEDVVLF FDQMDWIEQY EPIDAFDFNN NNAIDFNDIV VLFNQL
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