| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1677 |
|---|
| Symbol | |
|---|
| ID | 7271240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1736703 |
|---|
| End bp | 1736921 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643570294 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002466710 |
|---|
| Protein GI | 219852278 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA AGATCAAGGT TTTTCGGGCG ATGAACGATC TCACGCAGGA AAACCTTGGG
GTGGCTATTG GGGTCAATCG TCAGACTATT CTTGCTATTG AAAAGGGAAA ATATGTTCCA
TCTCTCGATC TTGCCTTTAA AATTGCACGA TATTTTGGGG TGAATATAGA AGATATGTTC
ATTTATGAGG AGGAGAACTC AATAAATTTG GCTCATTAA
|
|---|
| Protein sequence | MKNKIKVFRA MNDLTQENLG VAIGVNRQTI LAIEKGKYVP SLDLAFKIAR YFGVNIEDMF
IYEEENSINL AH
|
|---|
| |