| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1667 |
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| Symbol | |
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| ID | 7271224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1718928 |
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| End bp | 1721507 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570280 |
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| Product | calcium-translocating P-type ATPase, PMCA-type |
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| Protein accession | YP_002466702 |
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| Protein GI | 219852270 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.445912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCC CTGTCCTGGC CCCGTACGAA GAACTGGTGT CCATCACCGG CGATCAGGGT
CTGCCTCTCT CCCGTGTCGA GGAGATGCGC CGGAAGTACG GGGTCAACAC GATCACCCCT
CCTCCCCGGG AGCCGCTCTG GAGACAGTAC CTCCGAAAGT ATGACGACCC CATCATCAAG
ATCCTTCTCT TCGCTGTCGC CCTCTCCGCC CTCGTCTCCA TCATCAGAGG AGAGGGACTG
CTGGACACCA TCGGGATCGT CATCGCGGTC CTCCTCTCGA CCCTGATCGC ATTTCTCAAT
GAGTACCGGA GCAGTAAAGA GTTCGAGCTG CTCAATGCAC ACCGCGACGA CCTGGCGATC
AAGGCAGTCC GAGACGGCCA CCCTGTATCA GTACCTTCCC GCGAGATCGT GGTCGGGGAC
CTGGTCCTGC TTGAGGCCGG CGACGGGATA CCGGCCGATG GCTGGGTGGT CTCAACCGAC
GATCTCACCT CCGACGAATC GGCCTTCACC GGTGAGACCG AACCGGTCGC GAAAGGGGTG
CAGGATCGCC TGTTGAAAGG GGCGCTGGTC ACCGCTGGCA AGGGTAGGAT GATCGCAGGG
GCGGTCGGGG ACTCGGCAGA GATGGGCGTG ATCGCCGCTT CGCTGGGGAT CGATCATGCG
ACCCTGACAC CGCTCGAACA GAAGCTGGAA GCGCTCGCCC GCATCATCAG CTCTTTCGGG
TACGGAATGG CCGTTTTGAT CTTCTGCACC CTGCTCGTCC GCGGTATCAT CCTCGGTGAG
ATCACCGGGC TGACCATAAC CACAGTTGAT GTCATCCTCC ATGACGTGAT GCTCGCCGTC
GTGATCGTCG TCGCCGCAGT CCCCGAAGGA CTGCCGATGA GCGTCGCCCT CTCCCTTTCG
CTGGCGATGC GGAAGATGGC GAAGGCGAAC TGCCTGGTTC GCCGGCTGAT CGCCTGTGAG
ACGATCGGTT CCGCTACGAC CATCTGCACT GACAAGACCG GTACGCTGAC CATGAACCAG
ATGGTGGTGA TCGAAGCATC GATCAACAGG CCGGTTCACG CCGGACGATT CCCGGAGACG
CGGGCCGAAT GGATCACGCT CAATGCCGCG GTGAATGGGA CGGCATATCT CGAGGAGCGG
GACGACCGGG TGATCGTCAT CGGGAACTCC ACCGAGGGGG CGCTTCTCCG GTGGCTTCGG
GAGCATGCGC TCGATTATCT CCAGATCCGG AGAGAGACCG ATATCATCAG GCAACACCTC
TTCGACGGGA GACGGAAACG GATGTCCACC GTCATCTCCC AGGACGGCCG GTCCTGGCTT
CTGGTGAAGG GTGCACCGGA GGTGCTGGCA TCGCTCTGCA CAGAGAGCCC GGACCTTGAC
GAGGTGCATG CCCTCGCATC CCGGGCGATG AGGACGCTTG CGTTTGCCCA CAGGGAGATC
ATCGACGATG ACGAGGCCGA GACCGGGTTG ATCTGGGATG GGTACGTCGG GATACGCGAC
CATCTCAGGG ATAAGATCGC AGAATCGGTC GCCACCTGCC AGCGGGCCGG CATCCGGGTC
CGGATGGTCA CCGGGGATAA TGCCGAGACG GCTCGGGCCA TCGCAGCGGA GGCGGGGATT
CTGCAGGGTG GGACGGTCAT GACCGGTGAA GCGTTCCGTT CTCTCCCGCC CGACGAGCAG
GTCGGGGCTG CAGATGAACT GGACGTGATG GCCAGGGCGG AACCCCTCGA CAAACTGCTG
CTCGTTTCTG CCCTCCAGAA GACCGGGGCC GTCGTCGCTG TCACCGGTGA CGGCACCAAC
GACGCTCCGG CGCTCAAGCA TGCCGATGTG GGGCTGGCCA TGGGGATCGC CGGCACCGAG
GTGGCGCGGG AGGCGAGCGA CATCATTCTC CTCGACGATT CGTTCGCCAC GATAACCAGC
GCTGTCTGGT GGGGTCGGTC GCTCTACGAG AACATCCAGC GTTTTGTCCT CTTCCAGCTG
ACCCTCAACT TCAGTGCCTG TATCCTGATC TTCACCGCCC CGCTCCTCGG GTTACCGGAA
CCCTTCACCA TCATCCAGGT GCTCTGGATC AACCTGATCA TGGATACGCT CGCAGCCTTC
GCCCTCTGTT CCGAGGCCCC CCATCCAGAA CTGATGAACA ACCAGCCGAT CTCACATGAC
GCCCCAATCG TCACACCGTT CATGTGGCTC TCGATCGCTG TCACCGGCCT CTTCCTGATC
GTCGGCGGTC TGCTTCAACT GGCCACTGGT TTTCTGGGCG GCTCGACGCC GACGGAGATC
GGCACGGTCT TCTTCGCCGC GTTCATCTTC GTTGCGGTCT GGAACGGGAT CAACTGCAGG
GCCCTCGACG GAAAGATGCC CCCCTTCTTC CGGGGCAACC CGACCTTCTT TGCGGTGACC
ATCTTCATCG TCGCCGTCCA GGTGCTGATC GTCCAGTACG GCGGTGTATT CTTTGAGACC
GTCCCCCTCT CCCTGGAACT GTGGGTGCGG ACTGGCGTGG CGTCGGCCTC GGTGCTGGTG
GTCGGAGCTC TGCTCCGCTT TGGGTACCAA GTCCATAACG TTTATCTTTC CCCGAAATGA
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| Protein sequence | MRTPVLAPYE ELVSITGDQG LPLSRVEEMR RKYGVNTITP PPREPLWRQY LRKYDDPIIK
ILLFAVALSA LVSIIRGEGL LDTIGIVIAV LLSTLIAFLN EYRSSKEFEL LNAHRDDLAI
KAVRDGHPVS VPSREIVVGD LVLLEAGDGI PADGWVVSTD DLTSDESAFT GETEPVAKGV
QDRLLKGALV TAGKGRMIAG AVGDSAEMGV IAASLGIDHA TLTPLEQKLE ALARIISSFG
YGMAVLIFCT LLVRGIILGE ITGLTITTVD VILHDVMLAV VIVVAAVPEG LPMSVALSLS
LAMRKMAKAN CLVRRLIACE TIGSATTICT DKTGTLTMNQ MVVIEASINR PVHAGRFPET
RAEWITLNAA VNGTAYLEER DDRVIVIGNS TEGALLRWLR EHALDYLQIR RETDIIRQHL
FDGRRKRMST VISQDGRSWL LVKGAPEVLA SLCTESPDLD EVHALASRAM RTLAFAHREI
IDDDEAETGL IWDGYVGIRD HLRDKIAESV ATCQRAGIRV RMVTGDNAET ARAIAAEAGI
LQGGTVMTGE AFRSLPPDEQ VGAADELDVM ARAEPLDKLL LVSALQKTGA VVAVTGDGTN
DAPALKHADV GLAMGIAGTE VAREASDIIL LDDSFATITS AVWWGRSLYE NIQRFVLFQL
TLNFSACILI FTAPLLGLPE PFTIIQVLWI NLIMDTLAAF ALCSEAPHPE LMNNQPISHD
APIVTPFMWL SIAVTGLFLI VGGLLQLATG FLGGSTPTEI GTVFFAAFIF VAVWNGINCR
ALDGKMPPFF RGNPTFFAVT IFIVAVQVLI VQYGGVFFET VPLSLELWVR TGVASASVLV
VGALLRFGYQ VHNVYLSPK
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