| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1666 |
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| Symbol | |
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| ID | 7271981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1716153 |
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| End bp | 1718918 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643570279 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002466701 |
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| Protein GI | 219852269 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.921097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCC CTGAGCAGAA ACGGGCGATC GCGTTTCGCG ACGGAAACCT GCAGGTGATC
GCCTGTGCCG GCTCGGGTAA GACCGAGACG ATCACCCGGC GCATCGCGGG TCTCGTCGCC
GGGGGCGTGG ATCCACGATC TATCGTTGCC TTCACCTTCA CTGACCGGGC TGCAGCGGAG
ATGGCCGATC GCCTCCGTCT CCACCTGCAG ACACTGGTCC CGGGGGAACC TGACCTGGCC
GGCCTCTCTG TCGGCACCAT CCATGCTTAC TGCGATCAGC GACTGAAAGA GGTTCTGCCG
AGGTACCGAT CCTTCGACCT GCTCGACGAT GATATGCGGC CGCTCTTCTG TTCCCGTTAC
TACCATGACT TCGGTTTCGA GGACCTCCTC GTCCATTACC AGGACCGGCG CCGCGAGCCG
TCGCGGTATG AAATCATCCA TGACTTCTGC AGGAATGCCG ATCTGGTCAG GGACGAGCGA
ATCGATCCGG CCGGTCTTGG TTTGCCCTTC TGCGAGTGTT ACCGCGCCTA CCTCGACCAC
CTTCAAGCAG ACCATTACAT CGACTTCACC GGGATGATTG CCCATTATGT CGAGGCGCTC
GAAGAGGACC CCGCCCTGCT CGCCCGTGAG AGGGGACGGG TCCGGTACCT GATCGTCGAC
GAGTACCAGG ACATCAACAC TCTTCAGGAG GAACTGATAC GCCTGATGGT CGGCAGCACC
GGGAACCTCT CCGTCGTCGG CGATGACGAC CAGTGTATCT ACCACTGGCG GGGCTCGAAC
TATGAGAATA TCATCTCGTT CGGCACCCGG TACCCCGACG TCACGACCGT CCGTATCCAG
CAGAACTTCC GGTCGACCCC GGGGATCATC AGTGCCGCAT CCCGGGTGAT CGATCGAAAT
GAACTCAGGC TGCCCAAGAT GATGGAGCCC TGGCCCGAGG GGTTGGGGCA GACCGAGGAG
GGCGACATCG CCACCTGCTT CTTCGACGAT GAAGAAGAGG AAGTGGCAGG GATCGTCGGG
CAGATCCAGG CACTCCTGGG TCGGGAGTAT ATCAATAATC AGGGCGAAGA GCGAACACTC
TCCTATCGTG ACATGGCGGT GTTGATGCGT TCTGTCCGGG TGTATGCCCG TTCTCTCATC
TCCGCTCTGG AGAGGGCCGG GATCCCCTTC GTCGTCAGGG GAGGTCGGCT CTTTGAACGG
CCTGAGGTCG TGATCGTGAT GCAGGCCCTC GCCTTCCTCG GTGAATACCC CTATCCCCTC
AGAAGCCCGG TTCCAGTGCA CCTCCCCCTC CTCGAGGAGG CATACCTGGC GCTTGGTTAT
GGGGAGGCGG CCGACTGTGC ATTGTTCCTG AAATTGATGA CGGACCTGAA GCGGGAGATC
GATCGAAGCG AGTCATTCAG TCTGCAGACG CTCTTCCACC GGGTGGTGCA GGCCATGGGG
GGTGATCGGA CCCCTTTCCC TGAGGTCTGG TATTACAACC TCGGCAATCT CTCGCAACTG
GTCTCTGCAT TCGAGCACCA GTATCCTCTG ATAACTACGA TGGAGATCCA CCGTTTCCTG
GAGTACATTC AGGAGCATGC GATGAAACAG GCTGAGGAGG GCGGGGCAGG GGAGGAACTC
CTCCCGGATG CGGTGACCGT CACCACACTC CACAAGGCCA AGGGCCTCCA GTTCCCGGTC
GTCTTCATCC CCCGACTGAA CACCGGCGAG TTCCCCTCGG ACCGGCCGGA CCGGGCGGTC
TGGTTTGTGC CGTCGCCCCT CTTCGACCGA GATCGGTATA CCACCAGCCT TGAAGACGAG
CGACGGCTCT TCTATGTTGG CATCACCCGG AGCGAGAAGT ACCTCTTCCT CTCCGGCCAT
CGGCAAAGAT CCGGGGACCT TCCTCCTGCA GAACCGTCGA CCTTCTTCTC TGAATACCCC
CGTGACCATG TCGTCGATCG CTTTCCTTGC CCAGCCAAGG GCGGGGAGAC CAGCCATACT
GCTACTCCAA TATCGGATCG ATCGCCGGCC CGGATTGAGA CGAGCTGGTC GGCCCTTCGG
TATTATGCCC ACTGTCCGTT CGACTACAAA CTCCGGCACC TCTACGGGTT CGATCCGATG
CCCAGGGAGG AACTGGGTTT CGGGCGGGCC GTCCACTCGG TGCTTGCAGC CGTGCATACA
CAGATAGTCA GAGGAACGTT CGATCCCGCA GAGATCCCGG ATCTGGTCGA TGAGCACCTG
CTCCTCCGCT TCGCCCCGGC GGGGACGACC GAGCGGGTGC AGGGGATCGT CGCCAGGCAG
ACCCTTCGCT ACGTGGAACA GAACAGCCAT GACTTCGCCC GGATCGCCGG TATCGAGCTG
CCGTTCTCGT TCGCTGTTGG GAATGGCGTG GTGAACGGGG CGATGGACCT CATGCTCGGC
GATGGTGACG GCGGGGTTGA ACTCCGAGAC TTCAAACTGA CTGAGGAGGG GGAGGCCTCG
TTTCGTCCCG ATGTCGAGCG GCAGCTCCAG GTCTATGCTC TGGCTGCCCG GTCGCTTGGT
CACGAGGTAC ACAAGGCGAC GATCTATCAC TTCGATACCG GTTCGATCAC TGAGGTGGCG
GTGGGGCCGG CAGCACTCGC CGAGGCGCAA ACTGCCGTGG AGAGGATGAT TGTCGGGATC
CAGAACCAGG AGTTCCCCCG ACGGCCGGCA GCAGATCGGT GCGCGAACTG CGATTGGCAC
TGCCTCTGCG ACGAGACTGA AGCGTGTGCT GCAGAACTTC ACACGGTGAA GACGGATGAT
TGTTAG
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| Protein sequence | MLTPEQKRAI AFRDGNLQVI ACAGSGKTET ITRRIAGLVA GGVDPRSIVA FTFTDRAAAE
MADRLRLHLQ TLVPGEPDLA GLSVGTIHAY CDQRLKEVLP RYRSFDLLDD DMRPLFCSRY
YHDFGFEDLL VHYQDRRREP SRYEIIHDFC RNADLVRDER IDPAGLGLPF CECYRAYLDH
LQADHYIDFT GMIAHYVEAL EEDPALLARE RGRVRYLIVD EYQDINTLQE ELIRLMVGST
GNLSVVGDDD QCIYHWRGSN YENIISFGTR YPDVTTVRIQ QNFRSTPGII SAASRVIDRN
ELRLPKMMEP WPEGLGQTEE GDIATCFFDD EEEEVAGIVG QIQALLGREY INNQGEERTL
SYRDMAVLMR SVRVYARSLI SALERAGIPF VVRGGRLFER PEVVIVMQAL AFLGEYPYPL
RSPVPVHLPL LEEAYLALGY GEAADCALFL KLMTDLKREI DRSESFSLQT LFHRVVQAMG
GDRTPFPEVW YYNLGNLSQL VSAFEHQYPL ITTMEIHRFL EYIQEHAMKQ AEEGGAGEEL
LPDAVTVTTL HKAKGLQFPV VFIPRLNTGE FPSDRPDRAV WFVPSPLFDR DRYTTSLEDE
RRLFYVGITR SEKYLFLSGH RQRSGDLPPA EPSTFFSEYP RDHVVDRFPC PAKGGETSHT
ATPISDRSPA RIETSWSALR YYAHCPFDYK LRHLYGFDPM PREELGFGRA VHSVLAAVHT
QIVRGTFDPA EIPDLVDEHL LLRFAPAGTT ERVQGIVARQ TLRYVEQNSH DFARIAGIEL
PFSFAVGNGV VNGAMDLMLG DGDGGVELRD FKLTEEGEAS FRPDVERQLQ VYALAARSLG
HEVHKATIYH FDTGSITEVA VGPAALAEAQ TAVERMIVGI QNQEFPRRPA ADRCANCDWH
CLCDETEACA AELHTVKTDD C
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