| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1663 |
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| Symbol | |
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| ID | 7272205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1711724 |
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| End bp | 1713448 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643570276 |
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| Product | circadian clock protein KaiC |
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| Protein accession | YP_002466698 |
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| Protein GI | 219852266 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | [TIGR02655] circadian clock protein KaiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.455072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGGAGTG AGAAAGGAAT CACGATAACG AATGCACCAG AACTGGAGAA GGTGCCTTCA
GGGATCAGCG GTCTTGACGA GATTACCGGT GGCGGACTGC CGAAGGGCCG GCCGATCCTG
GTCAGCGGGG GTCCCGGATG CGGTAAGACG CTCTTTGCCA TGGAGTTCGT GGTTCGTGGA
ATCGTCGATC ATGGCGAGCC GGGCGTCTTC GTCGCCTTTG AGGAGAAGGT CGACGACCTC
ATGAAGAACT TCGCGTCGAT GGGGTTCGAT CTTTTTGACC TGATCGAGCA GAAGAAGATC
GTCCTCGACC ACATTTTCAT CGACCGGTCT GAGATCGAGG AGGCCGGCGA GTACGACCTC
GAAGGGCTCT TCATCCGCCT TGGAATGCTC ATCGACCGGG TTGGCGCAAA GAGGATCGCC
ATCGACACGA TCGAGGCGAT CTTCTCAGGC TTCTCCAACG AGGCGATCCT TCGTTCAGAA
CTCCGCCGGC TCTTTCTCTG GCTCAAGGAC CGGGGAGTCA CGGCGGTCAT CACCGGAGAA
CGTGGAGATC GGACGATCAC CAAGTACGGG CTTGAGGAGT ATGTGGCCGA CTGCGTCATC
ACCCTCGATC ACCAGGTGAA CCATCAGATC GCGACCAGGC GGCTCCGGGT GGTCAAGTAC
CGCGGGAGCG TCCATGGCAC GGACGAGTAC CCGTTCCTGA TCAGCGAGGA TGGGATCTCG
GTGCTGCCGA TCACCTCGAT GTCCCTCCAT CATCCGGCCT CGACCGAACG GGTCTCGACC
GGCATCCCGC GGCTCGATAC CATGCTGGGC GGCCTCGGGT ACTACCGCGG CAGTTCGATC
CTGGTCTCCG GCCAGGCCGG GACCGGCAAG ACCAGCCTGG CCTCCACCTT CGTCGATGCC
GCGTGCCGGC GGGGGGAACG ATGCCTGTAC TTCCTCTTCG AGGAGTCGGA GAGCCAGCTC
CTGCGGAACA TGCGTTCGAT CGGGATCGAC CTGGCGCCCT GGGTGGAGCA GGGTCTCCTC
CGGTTCCACG CAGTCAGGCC GACCGCGTAC AGCCTGGAGA TGCACCTCTC GATGATGCTC
AAACTGATGG AGGAGGTCTC CCCACTGATC CTGGTCGTCG ACCCGATCTC GAATCTCTTC
CCCGTGGGCG ACGACCTGCA GGTCCGTTCG ATGCTGATGC GCCTGATCGA TCATGCAAAG
ACGCTCGGGA TCACCGGACT CTTCACGAAC CTCTCAGACT CCTCGATGAC CGGGTCGTTG
GCGCTGGAGA CCACCCAGAT GCATGTCTCC TCCCTGATGG ATACCTGGCT CCTCCTCAAG
AATGTCGAGG GGGGAGGAGA GCGGAACCGC ACGTTCGCCA TCGCAAAGTC ACGGGGGATG
CCCCACTCGA ACCAGCTCAG GGAGTTTGTC CTCTCAGATC AGGGGATCGA ACTCCTCGAT
GTCTATATGG GCGGTGACAG GGTCCTCTTC GGTTCGGCCA GGATCGCACA GGAGAATCGG
GACCTGGCTG AGGTGGCTCG GAACCGCGAG ACTATCGAGG CCGGGAAGCG GGAACTCGAA
CAGAAACGCC GCCAGATGGA GAACGAGGTC GCAGTGCTTC ACGAGCGGTT CGCCCGGGAT
GAGCAGGATC TTGCGATCCT CGTCGAGCAG GAGCAGGCAC GTGAGGACGC CGCCACGAAG
GCCCGCGAGG CGTTCGCTGC AGAGCGTCAG GCGGACCGAT CATGA
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| Protein sequence | MRSEKGITIT NAPELEKVPS GISGLDEITG GGLPKGRPIL VSGGPGCGKT LFAMEFVVRG
IVDHGEPGVF VAFEEKVDDL MKNFASMGFD LFDLIEQKKI VLDHIFIDRS EIEEAGEYDL
EGLFIRLGML IDRVGAKRIA IDTIEAIFSG FSNEAILRSE LRRLFLWLKD RGVTAVITGE
RGDRTITKYG LEEYVADCVI TLDHQVNHQI ATRRLRVVKY RGSVHGTDEY PFLISEDGIS
VLPITSMSLH HPASTERVST GIPRLDTMLG GLGYYRGSSI LVSGQAGTGK TSLASTFVDA
ACRRGERCLY FLFEESESQL LRNMRSIGID LAPWVEQGLL RFHAVRPTAY SLEMHLSMML
KLMEEVSPLI LVVDPISNLF PVGDDLQVRS MLMRLIDHAK TLGITGLFTN LSDSSMTGSL
ALETTQMHVS SLMDTWLLLK NVEGGGERNR TFAIAKSRGM PHSNQLREFV LSDQGIELLD
VYMGGDRVLF GSARIAQENR DLAEVARNRE TIEAGKRELE QKRRQMENEV AVLHERFARD
EQDLAILVEQ EQAREDAATK AREAFAAERQ ADRS
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