Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1656 |
Symbol | |
ID | 7272198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1704634 |
End bp | 1706070 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643570269 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002466691 |
Protein GI | 219852259 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.999121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCCAG AAGAGTGGAA ACATCAGTAT ATTTCTGACC TCCTGATACC TGCTCTGATC ATCATCTCGA TAACTGTCAT CTTCTTCATT GACCTGGTCA CGCCTTCTGA ATTCAGGGTT CTGACGCCGT ACGTCCTCCC TCTGATCCTG ACCATCTGGC TCCGGCAGCG GTGGGCGCCT TTCGCTGTTG CAGGGGTTTC AATTGTTCTC ATCATCATCA GTCTTCTCTT CACCTCCCCG GCAAATCTTT TTGAGACCGT CCTCGACCGG GCATTGTTCT GTCTGATCCT TGTCATCGCT GCAATAGGGA TCCAGACATA TACCGATCAG GTGGAGGCCA GGCAGAAATC TGCACGTTCT CTACGGAAGA TCATTGATTC GGCCGACAGC CTGATCTTTG TGAAAGACTT TGGGGGGCAT TTCCTCCAGG CAAATTTGGC AACGGCTCGA TTCTTCGGCA CGACTGTCGA CGGGATGATC GGGAAGACCG ACGAAGATTT CAGGTTCCTG GATACTGCGG ATCAGATCCG CCACCTCCAT GATGAGAACG CAGAAGTGAT TCACAGTAAA AATGAGATCC ACTCAGAAGC AGCGCTTTTC GGAGCGGATG GACAGATCCA CTGGTTCACC ACGGCCAAGG TTCCCATGCT GAATCCGGAG GGAGAGTGTG ACAGCGTGCT TGTTGTGGCG ACGGATATAT CTGAGCGCAA GAAGGCAGAG GAGAGCCTGA AGGAGTACGC CGGGAGACTG CAGCGGTCGA ACGAGGATCT ACAGCGGTTT GCGTACATCG CGAGCCATGA TCTACAGGAA CCGTTGCGGT CGATCGTCTC GTACAGCCAG ATGCTGGACC GGCGGTACCG GGGGAAATTA GACGCAGATG CTGATGAATT TCTGGAGTAC ATCGTCGAAG GTGGTCTCCG GATGCAGATG CTGATTCAGG ATGTGCTTGC GTTCTCCCGT ATCAATGCCA GTGAACCACA GTTCACAGAG ACCAATATCG AGGCCGTGCT GGTCGATGTG GAGGAAGGCC TGAACCAGAT GATCCAATCC TCTGGAGCGA CTATCACCCA TGAGCCGCTG CCGATGGTGA TGGCAGACCG GATGCAGATG GTTCAGCTCT TCACGAATCT GATCAGCAAT GCGGTGAAAT TTCACCGCCC CGGGGTGGTG CCGATGATCC ATGTCAGGGC CGGCAGGATC GGACAGTTCT GGGAGTTCTC GGTTGCAGAT AACGGAATCG GGATCGAATC AGATTACTTC GAGCGCATCT TTGTGATCTT CCAGCGGCTC CATACCCGGC AGGAGTACGA AGGGACCGGG ATCGGCCTCA CCATCGCCAG GAAGATCCTC GACCGACATG GCGGGCAGAT TCGAGTCACT TCGACGGTCG GGAGGGGAAC GACCTTCTAC TTCACGCTCC CGGCTACCGC CACCTGA
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Protein sequence | MSPEEWKHQY ISDLLIPALI IISITVIFFI DLVTPSEFRV LTPYVLPLIL TIWLRQRWAP FAVAGVSIVL IIISLLFTSP ANLFETVLDR ALFCLILVIA AIGIQTYTDQ VEARQKSARS LRKIIDSADS LIFVKDFGGH FLQANLATAR FFGTTVDGMI GKTDEDFRFL DTADQIRHLH DENAEVIHSK NEIHSEAALF GADGQIHWFT TAKVPMLNPE GECDSVLVVA TDISERKKAE ESLKEYAGRL QRSNEDLQRF AYIASHDLQE PLRSIVSYSQ MLDRRYRGKL DADADEFLEY IVEGGLRMQM LIQDVLAFSR INASEPQFTE TNIEAVLVDV EEGLNQMIQS SGATITHEPL PMVMADRMQM VQLFTNLISN AVKFHRPGVV PMIHVRAGRI GQFWEFSVAD NGIGIESDYF ERIFVIFQRL HTRQEYEGTG IGLTIARKIL DRHGGQIRVT STVGRGTTFY FTLPATAT
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