| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1654 |
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| Symbol | |
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| ID | 7272196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1702632 |
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| End bp | 1704053 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643570267 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002466689 |
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| Protein GI | 219852257 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAT CTAATCCAGA AGTCACTCAA AACACAGATC TGAAGATGAA GGCAGAGACC
GCTGGTGTCT CACTCTTACG GGGTGACCCA AAGAAGGCGA TCCTCAAACT CTCCGGACCG
ATGATCGTAG CGATGCTGTT GATGTCGCTG TACAACATAG TGAATGCTAT CTGGGTGGCC
GGGCTCGGCT CTGATGCTAT GGCAGCTGTC GGGTTCATCA CCCCGCTCTT CATGATTATT
ATGGGGCTTG GGGCTGGGCT TGGTGCAGGG GTCACCTCGG TGATATCACG ACGGATCGGG
GCGGAGGATA GGGAAGGAGC GGACAGCGCT GCAGTCCATG CGCTCTTGTT GATGCTCGCC
ATCTCAGCGA TCCTCACGGT TCCCCTGATC CTCTTCGCCC AGCCGATCGC CCTCCTCTTC
GGAGCAGGGA AGACGGCTGG ACTTGCAGCT GAGTACGGCC AGGTGATCTT CGCCGGGACC
GTTCTGCTCC TCTTCTCCAA TATCGGGTAC GCGATTCTCC GTGCCGAGGG GGACGCTAAA
CGGACCATGT ACGCGATGGT CGCCTCCTCG CTCATCAATA TGGTTCTCGA CCCGTTGCTG
ATCTATACGG CGGGTCTGGG GATCGCAGGT GCGGCCTGGG GGACGCTCAT CTCTGTTGGA
TTTGTATCAG TTGTCCTGCT CTACTGGTTC TTTGTGAAGC GGGACACCTA CATCTCGCTC
TCGTGGCAGC ATTTCAAACC CGACCGGGCG ATCGTGACAG ACGTCCTGAA GGTCGGACTC
CCGGCGAGCC TGGAGTTCGT ACTGATGTCG GCGCTTGCCA TCATTCTCAA CGGAATTCTG
GTGATCGTCG CTGGCACCGA CGCAGTCGCT GTTTATACGG CTGGCTGGCG GGTTGTGATG
TTTGCTATCA TTCCGGTGGT AGCAATTGGT ACCGCCGTGA CTGCAGTCAC CGGGGCAGCC
TATGGTGCAC GTCTGTATAA GCGTCTGCGG GTGATCCACC GTTTCTCGGT TGGATTTGGA
ATCGCTATCA CCCTTCTGAT CAGTGTGGTG ACCTACGTCT TCTCCCAGCA GATCGCCTAT
CTCTTCGCAT ACGCTCCGGA GAGCGCTCAT CTTTCTCCGA CGATTGCAGC CTTCCTGGCG
ACGATGTGTT TCTTCTATCC GTTCGTACCG CCGGGTATCA TGTCAGGCTG TGTATTTCAG
GGGCTGGGTC GGGGCGTTAA CTCGTTGATC GTCAGTCTGT TCCGGAACCT GCTCTTCATT
GCCGTCTTCG CCTATGTTCT TGGTGTCGTC CTTGGTATGG GAGAACATGG AGTCTGGTGG
GGGATCGTGA TCGGAGACAT TCTCGGCGGG CTGCTCGGGT ATGCCTGGGC CAGGTATCAT
ATCAGTCAGT TGATATCCCT ACCGGGTGCA TCGGCAGACT GA
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| Protein sequence | MTESNPEVTQ NTDLKMKAET AGVSLLRGDP KKAILKLSGP MIVAMLLMSL YNIVNAIWVA
GLGSDAMAAV GFITPLFMII MGLGAGLGAG VTSVISRRIG AEDREGADSA AVHALLLMLA
ISAILTVPLI LFAQPIALLF GAGKTAGLAA EYGQVIFAGT VLLLFSNIGY AILRAEGDAK
RTMYAMVASS LINMVLDPLL IYTAGLGIAG AAWGTLISVG FVSVVLLYWF FVKRDTYISL
SWQHFKPDRA IVTDVLKVGL PASLEFVLMS ALAIILNGIL VIVAGTDAVA VYTAGWRVVM
FAIIPVVAIG TAVTAVTGAA YGARLYKRLR VIHRFSVGFG IAITLLISVV TYVFSQQIAY
LFAYAPESAH LSPTIAAFLA TMCFFYPFVP PGIMSGCVFQ GLGRGVNSLI VSLFRNLLFI
AVFAYVLGVV LGMGEHGVWW GIVIGDILGG LLGYAWARYH ISQLISLPGA SAD
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