| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1647 |
|---|
| Symbol | |
|---|
| ID | 7272189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1696837 |
|---|
| End bp | 1698183 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643570260 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466682 |
|---|
| Protein GI | 219852250 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGC ATCTATCGTT TGATAGGAAA CGGTGGGGAA TCTGTCTCGC CGTCCTCGCC
CTCCTCCTCT CCTCCACATT GATCGGCTTG GTGAGCGCCA CCCCGCCTCC TCCCGACAAT
TATGCCTGGT GGGCCACGAC GAACACCGAA TACCTCAATG CATCAGATGC CGGCCTCTTT
GTCGAGACCG ACGGATACAT CTCCCGGCAG GGAAATGAGA AGAGACCACC ATTCCTATCG
AACGTCTCGG ATAATTATTA TTACACCAAC TTCACGTCTC CAAAGACCGG CGAACAGTAT
CTCACCGCCG TCTGGTACTT CAGAGACTGG GACGGGTTCA TAAAAGAGAA GGACGAACTG
CACCGGTACC TTCAACAGCA CGGTACAGTC ACTCCGGTCG CGCTCAATCT CTCTCCAGAA
CTCGCCGACT CCAATAGTTC CGACCTGGTG AACCTCTCCA GATCTGAGCA ATGGCAGGCG
ATCGACGCGA CCCAGTATGA GAGTGACGAG ACATCGGGGT ATCTCCTCAC TTTCGTCATG
GATTCGTACC CGGGGGTGAA CTACTACATC GCGTACTACG GGGTCGTGGG TCCAACCGAC
ATGAGAGAGG AAGCTCATCA TCTCCACCTC CTCGCGATGA CGAACCTTCC TGTAATGGTA
CTGGGTCACT TATACGTCTT CAACCCGGCG ACGCCGATGA TCAAGGTTTA TGATTCGTTC
ATCCCCAGAT TCGACATTAC AAACTGGACA AACTGGATCC CATTTCTCGA GATATTCATT
CTGATTCTCA TTGCAGTCAT CGGCTACACC CTCATCCCGA TCATTGCCCT CGCGTATATC
TCCGCCAGGA TATCTCTATG GATGGAGGCT CGCATGACTC CGCGGACCCG TGGTATCCTA
CCACTGATCG TCGCCGGTTG CCTGATCGGG GTGCTCGCCG TCAGAACTCT CTACGTTGAA
GAATTCTCGC TCGGTTGGAC CGATCTCATC GCCGCCGCAA TCCTCGTCCC AATGGGGGTG
CTGACCGTCA GACCACTCGT TAAAAAACAC CAGAAGTCTG TGAAGCCGAA GTCTGCCGTG
TTCCTCTGCG TGGTCTGGAC ATTCCTGACC ATCATCATTG GCACCGTGTT GTACTATCTC
CTGGGTGTAC GTTATGTCTT GAACACAGGT TCTCTCGAAC AGCCGCTCTT GTACATCATG
GGTCACTCTG TCGTCCTGCG TTCAATCATC ATGTACCTTG AGAGCGTGGT CATCGCCATC
GTTCTCTATG CAGTGATCCT GTTCTGGGAC CGGATCCGGA GACGCCGGCA GAGCAAGAAG
CATCCAGAGG AGGATGAAGA TCAGTGA
|
|---|
| Protein sequence | MSLHLSFDRK RWGICLAVLA LLLSSTLIGL VSATPPPPDN YAWWATTNTE YLNASDAGLF
VETDGYISRQ GNEKRPPFLS NVSDNYYYTN FTSPKTGEQY LTAVWYFRDW DGFIKEKDEL
HRYLQQHGTV TPVALNLSPE LADSNSSDLV NLSRSEQWQA IDATQYESDE TSGYLLTFVM
DSYPGVNYYI AYYGVVGPTD MREEAHHLHL LAMTNLPVMV LGHLYVFNPA TPMIKVYDSF
IPRFDITNWT NWIPFLEIFI LILIAVIGYT LIPIIALAYI SARISLWMEA RMTPRTRGIL
PLIVAGCLIG VLAVRTLYVE EFSLGWTDLI AAAILVPMGV LTVRPLVKKH QKSVKPKSAV
FLCVVWTFLT IIIGTVLYYL LGVRYVLNTG SLEQPLLYIM GHSVVLRSII MYLESVVIAI
VLYAVILFWD RIRRRRQSKK HPEEDEDQ
|
|---|
| |