Gene Mpal_1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1645 
Symbol 
ID7272187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1693944 
End bp1695287 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content55% 
IMG OID643570258 
Producthypothetical protein 
Protein accessionYP_002466680 
Protein GI219852248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAC ATCCGCCGTC TGAGAGGATA CGGTGGGGGA TCTGTCTCGC CGTCCTCGCC 
CTCCTCCTCT CATCCGCACT GATCGGCTCG GTGAGCGCCA CCCCGCCACC TCCCGACAAT
TATGCCTGGT GGGCCGCGAC GAATACCGGA TACCTCAATG CATCGGATGC CGGCCTCTTT
GTCGAGACCG ACGGATACAT CTCCCGGCAG GAACCTGAGA AGAGACCACC CTTCCTGTCG
AACGTCTCGG GTAATTATTA TTACACCAAC TTCACGTCTC CAGAGACCGG CGAACAGTAT
CTCACCGCCG TCTGGTACTT CGGTGACTGG GACATGTTCA CAAAAGAGCA GGACGAACTG
CACCGGTACC TTCAGCAGCA CGGTACAGTC ACTCCAGTCG CGCTCAATCT CTCTCCAGAA
CTCGCTGGCT CCAATAGTTC CGACCTGGTG AACCTCTCCG GGTCTGAGCA ATGGCGAGCG
ATCGATGCGA CCCAGTACGA GAGTGACGAG ACGTCGGGGT ACCTCCTCAC CTTCGCCATG
GATTCGTACC CGGGGGTGAA CTACTACATC GCGTATTATG GTGTCGTTGG CCCGGTTGAT
CTGAGAGAGG AGGCCCATCA CCTCCACCTC CTCGCCATGA CGAACCTTCC CGTAATGGTA
CTGGGTCACT TATACGTCTT CAACCCGACG ACGCCGATGA TCAAGGTTTA TGATTCGTTC
ATCCCCAGAT TCGACATTAC GAACTGGACA AACTGGATCC CATTTCTCGA GATATTCATT
CTGATTCTCA TTGCTGTCAT CGGTTACACC CTCATCCCGA TCATTGCCCT CGCATATATC
TCCGCCAGGA TATCTCTATG GATGGAGGCC CGCATGACTC CACGGACCCG TGCCATCCTG
CCACTGATCG TCGCCGGTTG CCTGATCGGA GTGCTCTCCG TCAGGGCCCT CTACGTCGAA
GAGTTCTCGC TCGGTTGGAC CGATCTCATC GCCGCCGCAA TCCTCGTCCC AATGGGGGTG
CTGACCGCCA GACCACTCGT TAAAAAACGC CAGAATTCTG TGAAGCCGAA GTCTGCCGTG
TTCCTCTGCG TGGTCTGGAC ATTCCTGACC ATCATCATCG GCACCGTGTT GTACTATCTC
CTGGGTGTAC GTTATATCTT AAACACAGGT TCTCTCGAAC AGCCGCTCTT GTACATCATG
GGGCGCTCTG TCGTCCTGCG TTCAATCATC ATGTACCTTG AGAGCGTGAT CATCGCCTTC
GTTCTCTACG CAGTGATCCT GCGTAAGAAT CTGATTTGGA GACGCCAACA GAGCAAGCAT
CCAGTGGAGG ATGAAGATCA ATGA
 
Protein sequence
MSSHPPSERI RWGICLAVLA LLLSSALIGS VSATPPPPDN YAWWAATNTG YLNASDAGLF 
VETDGYISRQ EPEKRPPFLS NVSGNYYYTN FTSPETGEQY LTAVWYFGDW DMFTKEQDEL
HRYLQQHGTV TPVALNLSPE LAGSNSSDLV NLSGSEQWRA IDATQYESDE TSGYLLTFAM
DSYPGVNYYI AYYGVVGPVD LREEAHHLHL LAMTNLPVMV LGHLYVFNPT TPMIKVYDSF
IPRFDITNWT NWIPFLEIFI LILIAVIGYT LIPIIALAYI SARISLWMEA RMTPRTRAIL
PLIVAGCLIG VLSVRALYVE EFSLGWTDLI AAAILVPMGV LTARPLVKKR QNSVKPKSAV
FLCVVWTFLT IIIGTVLYYL LGVRYILNTG SLEQPLLYIM GRSVVLRSII MYLESVIIAF
VLYAVILRKN LIWRRQQSKH PVEDEDQ