Gene Mpal_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1609 
Symbol 
ID7272151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1658251 
End bp1659144 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content37% 
IMG OID643570222 
Productrestriction endonuclease 
Protein accessionYP_002466644 
Protein GI219852212 
COG category[V] Defense mechanisms 
COG ID[COG1715] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.355055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.341579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC CTGATTATCA ATCGCTTATG CTTCCGTTAT TAGAAACACT TGGTGATACT 
CAGGAACATA AAATTAGAGA TATACGCAAC CTGTTAGCAG ATCATTTTGG ACTTACTCTT
GAAGAAAGAT CACTCCAGTC TCAAAATACC CTTTTTAACA AACGAGTGAG TTGGGCAAAT
TCATCTCTTA AAAATGCAGG GTTGGTTGAT AACTCCACTA GTGGCATCAT GAAAATCACC
CAAAATGGAT TGGAGGTCTT GAATCAACAT CCAATCCAGA TTGATAACGA TTTTCTGTCC
AAATTTCCTG GTTTTGTAAT ATTCAATAAA GGGAGGATAT CTTCAGGACC TGAAGAAGGA
GATCCAAAAA TAGAATTAAC CCCATATGAA TTACTCGAAA AAAGTTATCA GATAATTAGG
GATCAACTGG CTAATGATCT CTTAGAACAA GTATTCGCTA GTTCTCCCGT TTTTTTTGAA
AAGATGGTTA TCGATCTTTT ATTAGCAATG GGCTATGGGG GGTCAAGAAA GGATGCAGGA
GAAGCTATTG GTCGAAGTAA TGACGAAGGT GTTGATGGAA TCATTAAGGA AGATAAACTG
GGTTTGGATG TAATTTACAT CCAAGCAAAG AGATGGAAGA ATCCTGTTGG TCGCCAGGAG
ATTCAAGGAT TTGTGGGTAG TCTTGAGGGT AAAAAAGCAC GCAAAGGAAT TTTTATTACA
ACTTCTCAAT TTACCAAGAC GTCAATAGAA TATGTTAAAT CGATAGAAAA AAAGGTGATT
CTGATTGATG GCATCCAGTT GTCCCAATTC ATGATAGATT ATGGTGTTGG CGTAACAGAT
CTTAACACGT ACATAATTAA ACGAATTGAC TCTGATTATT TTATAGAGGA ATAG
 
Protein sequence
MAIPDYQSLM LPLLETLGDT QEHKIRDIRN LLADHFGLTL EERSLQSQNT LFNKRVSWAN 
SSLKNAGLVD NSTSGIMKIT QNGLEVLNQH PIQIDNDFLS KFPGFVIFNK GRISSGPEEG
DPKIELTPYE LLEKSYQIIR DQLANDLLEQ VFASSPVFFE KMVIDLLLAM GYGGSRKDAG
EAIGRSNDEG VDGIIKEDKL GLDVIYIQAK RWKNPVGRQE IQGFVGSLEG KKARKGIFIT
TSQFTKTSIE YVKSIEKKVI LIDGIQLSQF MIDYGVGVTD LNTYIIKRID SDYFIEE