Gene Mpal_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1601 
Symbol 
ID7272143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1649203 
End bp1649499 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content56% 
IMG OID643570214 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002466636 
Protein GI219852204 
COG category 
COG ID 
TIGRFAM ID[TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0865232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.749464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTCA TCGTGGTTGA GAATGTCCCC CCGCGGTTGC GGGGGAGACT CGCGGTGTGG 
CTGCTGGAGG TGCACACCGG AGTCTACGTC GGGGACTTCT CAGTGAAGGT GAGGGATATG
ATCTGGGATC AGGTTTACGA AGGTGTCGAT GATGGAAATG CTGTAATGGC CTGGAGCACG
AACAATGAGT CGGGGTTCGA CTTTGTCACC GTCGGGCCGA ACCGGCGCAT ACCCATCGAG
TGCGACGGAT TGAAACTGGT CTCGTTTTTG GCACAGGCCG TAGATAGAGA TGAATGA
 
Protein sequence
MLVIVVENVP PRLRGRLAVW LLEVHTGVYV GDFSVKVRDM IWDQVYEGVD DGNAVMAWST 
NNESGFDFVT VGPNRRIPIE CDGLKLVSFL AQAVDRDE