| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1593 |
|---|
| Symbol | |
|---|
| ID | 7272135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1635897 |
|---|
| End bp | 1636619 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643570206 |
|---|
| Product | membrane-bound metal-dependent hydrolase |
|---|
| Protein accession | YP_002466628 |
|---|
| Protein GI | 219852196 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.496879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCC GTCACCATAT CAGTCTCGCA TGCGGGGGGA TGCTCATCCT GTACCTGCCC
CTGATCGCGG GAAACCCAAT TCTGCTTCCA GTGGTCGGTT CCGGGGTCTG TGTCGGCGCC
GTTCTGCCGG ACATTCAGAT GAAGCGGCCC CGGCGGTTCA ACGCATTATC CCCAATCTGG
CTTCTGATCC AGATCTTCAA GAAGACCGTG CTGCGTCTCT ACATCTCCCT CTGTGAACGG
TTCCTGGGGG TGCAGACAGA GGCTGAAGAC AAACGGCTGA CCCACTCCCT TCCAGGCCTC
TTCTTCCTGA CCGGCTTTAT CGCGTGCTGC GTCCTCCTGA TCATGGGGCT GTTCCCACTC
AGTCCGGAAC TCCATTACCT GAGAGTATTC TCTGCCGGCA TCATCGTCGG CCTGCTCTTC
CACTTCTTTG AGGATCTCTG CACCAAGAAG GGGTTGTGCC TCATGTACCC CTTCAACGAG
ACCTGCCGGA TCTCCGGGAG TATCCGACCC TGCAACAAAG AGGATTTCCG TATCCGGCAC
TTCCATATCA TGACCGGCGT CACGATTGTC GCAATATTCC TGCTCTACTG CACAGGACTC
TGCCCGGACG ACCTGAAGTG GCCGGTGAGT ATCGGAGCCC TGGCCGCCTG TGCGGTTATG
ATGCTGCACG ATGCAGAGGT CAGGATGACC GTAACGCCTA GAGGGGATCG GCATCACAAC
TAA
|
|---|
| Protein sequence | MITRHHISLA CGGMLILYLP LIAGNPILLP VVGSGVCVGA VLPDIQMKRP RRFNALSPIW
LLIQIFKKTV LRLYISLCER FLGVQTEAED KRLTHSLPGL FFLTGFIACC VLLIMGLFPL
SPELHYLRVF SAGIIVGLLF HFFEDLCTKK GLCLMYPFNE TCRISGSIRP CNKEDFRIRH
FHIMTGVTIV AIFLLYCTGL CPDDLKWPVS IGALAACAVM MLHDAEVRMT VTPRGDRHHN
|
|---|
| |