| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1584 |
|---|
| Symbol | |
|---|
| ID | 7272126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1630365 |
|---|
| End bp | 1630865 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570197 |
|---|
| Product | protein of unknown function UPF0066 |
|---|
| Protein accession | YP_002466619 |
|---|
| Protein GI | 219852187 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.467198 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGT TCACACCCAT CGGCATCGCC CATTCACCGT TTCAGACCGC AGGAGCTCCC
CCGTTCCAGA GCACCTTCTC ACAGGCAGAG GGGACCATCG AGGTCTTTCC TGAGTTCCAG
GAAGGGCTCA ACAGTATCGA GGGGTTCTCC CACCTGATCC TCCTCTCCCA TTTTAACTGC
GCAGAGCGAT GTGCCCTGCT TGAGAAGCCC TTATCGGACG GGGTGGTCTA CCACGGCATC
TTCGCATCAC GCCATTTCAA TCGCCCTAAT CCGATCGGGA TCTCCTACGT CGCCCTCACC
GGGGTCGATG ACGGAACCCT CCGTGTCACG GGTCTCGACC TTCTCGAAGG CACCCCGATC
CTCGACATCA AACCCTATGT GCCGGCCTTC GACAGTATCC CCGATGCCGT CACCGGCTGG
GTATCGGCGC AGCATATCGA GAGGATCCGC GAGACGAGCA TTCGCGCCCA GCAGGATCTG
GTCCGTCAGC AGTCCCGGTA A
|
|---|
| Protein sequence | MTEFTPIGIA HSPFQTAGAP PFQSTFSQAE GTIEVFPEFQ EGLNSIEGFS HLILLSHFNC
AERCALLEKP LSDGVVYHGI FASRHFNRPN PIGISYVALT GVDDGTLRVT GLDLLEGTPI
LDIKPYVPAF DSIPDAVTGW VSAQHIERIR ETSIRAQQDL VRQQSR
|
|---|
| |