| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1547 |
|---|
| Symbol | |
|---|
| ID | 7271092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 1598536 |
|---|
| End bp | 1599093 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643570161 |
|---|
| Product | GMP synthase subunit A |
|---|
| Protein accession | YP_002466583 |
|---|
| Protein GI | 219852151 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCCA TCTTTGTTGT CAATAACTTT GGGCAGTTCA ACCATCTGAT CGTGCGGATG
CTCCGCGACC TCGATATCGA TGCAAAGATG GTCCCGAACA CCACTTCACC CGATGAGGTG
CAGAGTGGGT GCCGCGGTCT GGTCCTCGGC GGTGGTCCCT CGATCGAGCG GACCGGCAAC
TGCGCAGCCT ACCTCGACCT GGGACTGCCG GTGCTCGGCG TCTGCCTTGG CCTGCATGTG
ATCGCGACCA GATTCGGTGG CACCGTCACC CCGGGCAGGA GCGGCGGGTA TGGAGCGGTT
GAGGTGGAGA TCGAGGACCA CGATACAGTC CTTGCCGGCT ATCCGGACAC GATCGAGGTC
TGGGCCTCGC ACGCCGATGA GGTCTCGGTG ATCCCGAACG GCTTCAAACG GCTTGCCCAC
TCCCCCATCT GCCAGGCCGA GTCGATAGCA TGCCCGGAAA AACAGATCTA CGGGGTGCAG
TGGCATCCCG AGGTCAGTCA CAGTCTGGAT GGCAGGGTCG TCTATCAGAA CTTCAACCAG
GTTACCCTTG ATGGATAA
|
|---|
| Protein sequence | MLPIFVVNNF GQFNHLIVRM LRDLDIDAKM VPNTTSPDEV QSGCRGLVLG GGPSIERTGN
CAAYLDLGLP VLGVCLGLHV IATRFGGTVT PGRSGGYGAV EVEIEDHDTV LAGYPDTIEV
WASHADEVSV IPNGFKRLAH SPICQAESIA CPEKQIYGVQ WHPEVSHSLD GRVVYQNFNQ
VTLDG
|
|---|
| |