Gene Mpal_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1541 
Symbol 
ID7271086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1593349 
End bp1593582 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content48% 
IMG OID643570155 
ProductLike-Sm ribonucleoprotein core 
Protein accessionYP_002466577 
Protein GI219852145 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.676832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAACG GTATCGTCTT ACCCATAAAG AAGGTTTTTG CTCTCGTTGA TTCAAAAATC 
TCAGTTGAGA TCAAGGACGA GGGGCGCATA TTGGAGGGGA GACTCGTTGC GGTGGATGAG
TATCTGAACA TCCATATGGA TGAGACCATC GAGCTCAATG CCGCCCAGAA GCGGAACCTC
GGCACTGTGG TGATCAGGGG CAATAACATT CTGACGATTG CACCTATGGT ATGA
 
Protein sequence
MVNGIVLPIK KVFALVDSKI SVEIKDEGRI LEGRLVAVDE YLNIHMDETI ELNAAQKRNL 
GTVVIRGNNI LTIAPMV