| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1518 |
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| Symbol | |
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| ID | 7271063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1571797 |
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| End bp | 1574106 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643570133 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002466555 |
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| Protein GI | 219852123 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTG ATCCCATTCG GGTACTGCTG GTCGAGGATA ACCCCGGTGA CGCCCGGCTC
ATCCGAGAGA TGCTGGTCGA GATCCATACT GACCGGTATG AGGTTGTGCA TGTCGAGCGG
CTTGAATATG CCCTGCTTCA TCTGAATAAT GAGAAGTTCG ATACGATCCT GCTGGATCTG
AACCTCCCTG ATGCCTACGG CCTTTCAACG CTGGTCAAGA TCAGAGCGAA GGCTCCGCAT
GTGCCGGTGA TCGTGGTCAG CGGGCTTGGT GATGAGGAGA TGGCGATCCA TGCCCTCAGA
GAGGGTGCCT ACACCTACCT CGTTAAGGGA CAGATGAGCG GCCATCTGCT CGACCGATCG
ATTCGATACA GTATCGAGCG GGAACGGATG GAACAGATCG TGCAGTTGCA GCGTGCACGG
GAGTACGCTG AGAATATCGT GGACACGATC AGGGAGTCCC TGATCGTGCT CGACAACCGG
CTGCGGATCG TGTCGGCGAA TCGCTCGTTC TATCTGGACT TCCATGTCAC CCCAGAGCAG
GTCGAAGGGC GGTTTATCCA TGACCTCGCA GACCAGGAAT GGAATATCCC ACAGTTCCTG
GCCCTGCTTG AAAAGATCCT GCACCACAGT TTCCAGTATG AAGGGCTCGA ACTTGACCAT
GAGTTCCCGG CCCTGGGCCG GCGTGTGATG CTGCTGAACG CCCGCTGGGT CTACGAGGAA
CGGGGGGACA CTGACCGGAT TCTACTCGCG ATGGAGGATA TCACCGAGCG AAAACGGGCA
GAAGAAGCTC TGGCTGACGA GAAAGAACGG TTGGCGGTGA CGCTCTGGAA CATCGGCGAG
GGGGTGATCG TCACTGATGT TGGGGGGTCG GTCGGGATGA TGAACAGGGT CGCCGAGAGC
CTGACCGGTT GGACTGCCAG CGAAGCCGTG GGATTACCGA TCGATCAGGT CTATCAGGTG
ATCAATGAGA AGACCAGGAA CCATTGCGTA AACCCGGTCG CTGCAGTTCT CAAAAAAGAG
GAGACGACCG ACTCATCCCA CTTCCGGCTG TTGATTGGGA AGGACGGGAT CGAACGACCG
CTCGGGGATA GTGTGGCGGC TGTCAGGGAC AAGGACGGCA AGATCATCGG GGTGGTGATC
GTGTTCCGCG ATATAACCGC AGCCCGGCGG ATGGAGGAGG ATCTCGCGAA GAACGAACGG
CTTGAGTCTA TCGGGGTGCT GGCTGGCGGA ATCGCTCATG ACTTCAACAA CGCCCTGACC
GCCATTGAAG GGAACATCGT TGTTGCCAAG GCGCATCTCA AGCCAGAGGA GAAGGCGTAC
GAACGGCTCT CTGAAGCTGA GATGGCCGCA CACCGTGCAA GAGATCTGAC CCGGCAACTG
TTGACCTTCT CACGCGGGGG GAAACCGATC AAGCGTCAAC TCCGCCTGAA CGATCTGCTG
ATCGATGCAG TCTCGTTTGC ACTTTCAGGT TCGGCTGTCA GAAAGAAGTT TTCGATTGCA
GAGGATCTCT GGCCAGTCGA GGCTGACGAG GGGCAGATTC GGCAGGTGAT CAATAATCTC
GTGATCAATG CAGATCAGGC GATGCCTGAC GGCGGGATCC TTGATGTGAT CGGAGATAAC
GTCTCCCTGG CCTCCGATCA GGTCCTTTCG CTGAAGGCGG GGAACTACGT CAGGATTGCG
GTAAAAGATC ATGGGATCGG CATTCCAAAG GAGTTTCTCT CGAAGATCTA CGAGCCGTAC
TTCACGACCA AGCAGAAGGG AAGCGGTCTT GGGTTGACGG TGGCCTATTC GATCCTTCGA
AACCATGGTG GTTCCCTGAT CGTCGACTCG GTGACAGGGG GCGGTTCAAC ATTCACCCTG
TACATTCCTG CCTCCCAGAT GCAGTTGCCA GTGGAATCTG TTCCTTCTGT TCATCCTCTT
CAAGGCAACG AACGGATCCT CTGGATGGAT GATGAGACGA TGATCAGGGA GGTTGGAGGG
GAGATGCTCT CGCTGCTCGG ATATCGGTTT GCATTTGCGG AGGAAGGGGA TCAGGCTATA
GAACTCTACA AGGCCGCTCT TGAATCTGAG TCGCCGTTTG ATGCGGTGAT CCTCGATCTG
ACCGGGGCCG GCGGGCTCGG TGGCAAGGAG ACGATCAAAC AACTCCTCGA ACTCGATCCG
CAGGTCAGGG CTATCGTCTG CAGTGGTTAC TCCAACGACC CGGTGATGGC CAACCATCGT
GAGTATGGGT TCCGCGGAGT GCTGACCAAG CCGTTTACGA TGAAGGAGCT CGACGACCAG
ATCCATCTGG TTATCGGTAC CGAAGAGTAG
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| Protein sequence | MDPDPIRVLL VEDNPGDARL IREMLVEIHT DRYEVVHVER LEYALLHLNN EKFDTILLDL
NLPDAYGLST LVKIRAKAPH VPVIVVSGLG DEEMAIHALR EGAYTYLVKG QMSGHLLDRS
IRYSIERERM EQIVQLQRAR EYAENIVDTI RESLIVLDNR LRIVSANRSF YLDFHVTPEQ
VEGRFIHDLA DQEWNIPQFL ALLEKILHHS FQYEGLELDH EFPALGRRVM LLNARWVYEE
RGDTDRILLA MEDITERKRA EEALADEKER LAVTLWNIGE GVIVTDVGGS VGMMNRVAES
LTGWTASEAV GLPIDQVYQV INEKTRNHCV NPVAAVLKKE ETTDSSHFRL LIGKDGIERP
LGDSVAAVRD KDGKIIGVVI VFRDITAARR MEEDLAKNER LESIGVLAGG IAHDFNNALT
AIEGNIVVAK AHLKPEEKAY ERLSEAEMAA HRARDLTRQL LTFSRGGKPI KRQLRLNDLL
IDAVSFALSG SAVRKKFSIA EDLWPVEADE GQIRQVINNL VINADQAMPD GGILDVIGDN
VSLASDQVLS LKAGNYVRIA VKDHGIGIPK EFLSKIYEPY FTTKQKGSGL GLTVAYSILR
NHGGSLIVDS VTGGGSTFTL YIPASQMQLP VESVPSVHPL QGNERILWMD DETMIREVGG
EMLSLLGYRF AFAEEGDQAI ELYKAALESE SPFDAVILDL TGAGGLGGKE TIKQLLELDP
QVRAIVCSGY SNDPVMANHR EYGFRGVLTK PFTMKELDDQ IHLVIGTEE
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