| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1507 |
|---|
| Symbol | |
|---|
| ID | 7271052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1551098 |
|---|
| End bp | 1551682 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643570123 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_002466545 |
|---|
| Protein GI | 219852113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.569037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0219561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAG TAGTTGCATT CAACGGGAGT CCCAGGAAAG ACGGGAACAC CTCCATTCTC
ATTGGGCATA TCTTTGATGA GCTGGAGAAA GAGGGGATCG AGACGGAACT TGTGCAGATC
GGGGTCGAAG CCTTCCGGGG ATGCATGGCC TGCATGAAAT GTCAAGAGAA GAAGGACGGG
CATTGTGTCT TCAACGACGA CATCGTCAAT AGCTGCATCG ACAAGATGGT GGAGGCTGAT
GGGATCATTC TCGGTTCGCC CGTGTACCTC GCGGATGTCA CCGCCGGCAT GAAGGGCCTC
ATTGAACGGG CGGCCTTTGT ATCGGCTGCA AACGGTAGAA CTCTCTTCCA GCACAAAGCC
GGAGCGGTGG TTGTGGCCGT CCGGAGAGCC GGAGCGATGA GGACACTGGA TACCATGCTC
CACTTCCTCC TCGCAACGGG GATGATTGTG TCGGATTTCG GTGTCATAGG AGTCGGGCTG
AACCCCGGCG ATGTGGACAA GGACCCGGAA GGAATCGCTA GTGCGGAAAG GGCCGGAAAA
AATATGGCCT GGCTCCTCAA AACGATGAAG AAAGGAACAT GCTGA
|
|---|
| Protein sequence | MTKVVAFNGS PRKDGNTSIL IGHIFDELEK EGIETELVQI GVEAFRGCMA CMKCQEKKDG
HCVFNDDIVN SCIDKMVEAD GIILGSPVYL ADVTAGMKGL IERAAFVSAA NGRTLFQHKA
GAVVVAVRRA GAMRTLDTML HFLLATGMIV SDFGVIGVGL NPGDVDKDPE GIASAERAGK
NMAWLLKTMK KGTC
|
|---|
| |