Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1502 |
Symbol | |
ID | 7271898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1546067 |
End bp | 1546654 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643570120 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002466542 |
Protein GI | 219852110 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.385487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.318035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC TGTTTCCAGG GTACAAAGAC GAAATCAAGA AAAAGATCGC AAACGAGGCA TTCGCGATAT TCCTTGAGAA AGGTTTTGAA AAGACTATGA TGGACGATAT AGCTGCTCGG CTTGGGGTGA CAAAGCCGGC ACTCTACCGT TACTACAAAA ACAAGGAGGA ACTTTTCATC GCTTCAATGG GCGATACGAT GTTGGGAGGA TACAGGATGA TATTTGCCAC TTCCTTTGCA TCGGACGACC CGATTACCGG CGCCGGAAAT TTTTTCGATG CCCTTCTTGT GATCAGCAGT AAATATTCAG TTATCAGGAA GGATTTGGAA TATATTATTT CCCGGAATCC ATCCCTCCAT CAAGAAATCG CGGGAATGTA TGGGGAAAGC CTTGTGGTTA TGCGGGATGT TTTCCAAGAG CATAAACGAA AGGGAAAGAT CCATACCACC ATGGAAGAAA CAGATCTTGC TTTTCTCTGC GGCGTTGTTG CGCAGGGTCT GATTAATAAT GTGGACATGG GACTGGACCC TGCTGAAGCA AAACGATTGT GGCTTCTCTG TTTTACAAAA CTTTCGGACG CCGGTTAA
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Protein sequence | MPKLFPGYKD EIKKKIANEA FAIFLEKGFE KTMMDDIAAR LGVTKPALYR YYKNKEELFI ASMGDTMLGG YRMIFATSFA SDDPITGAGN FFDALLVISS KYSVIRKDLE YIISRNPSLH QEIAGMYGES LVVMRDVFQE HKRKGKIHTT MEETDLAFLC GVVAQGLINN VDMGLDPAEA KRLWLLCFTK LSDAG
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