Gene Mpal_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1500 
Symbol 
ID7270105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1544090 
End bp1544818 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID643570119 
Producthypothetical protein 
Protein accessionYP_002466541 
Protein GI219852109 
COG category[R] General function prediction only 
COG ID[COG3943] Virulence protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.510294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG AGAGGGGGGA GCCGGTCGGA GGGGTGTCTG GGTCTCTTCT CTACCAGACC 
GAAGGAGGTG AGACCCGTGT CCAGGTCAGC CTCTTCGAGG GGACGGTCTG GCTGACGCAG
CGGTTGATCG CCGAGGTGTA TCAGAAATCG ATCAGGATGA TCGACGAACA TATCAAGAAC
ATCTATGAAG AGCGAGAACT CGACCCCCAG GCAACTATTC GGAAATTCCG AATAGTTCAA
TCGGAAGGGG ATCGCCAGGT CGAGTGTCTG GTCGACTTCT CCACCCTCGC TGTGATCCTC
GCCGTGGGCT ACCGGGTGCG GTCGCACAGG GGGACTCCAT TTCGGCAGTG GGCGACGAAG
CACCTGCGGG AATATGTGGT GAAGGGTTTT GTCCTTGATG ATGAGCGCCT GAAGGAGGCG
AGGGACTACT TCGATGAACT TCTGAAGCGG ATCCGTGACA TCCGGGCGTC GGAGCGGCGG
TTCTACCAGA AGATTGCTGA TATCTCTGCG ACGAGCGTCG ACTATGATCC GAAGGACCCG
ATGACACTTG AATTCTTCAG GACGGTGCAG AACAGGATGC ACCGGACGAT CCACGGGCAT
ACGCCGGCTG AAACGATCTC CCTCCGGGCT GATGCGAGGA AGCCGCACAT GGGGTTGTCG
ACCTGGAAGC AGGGGCCGAA AGGACGGATC CACAGGACCG AGGTGGGGGT TGCGAAGAAC
ACCCTCTGA
 
Protein sequence
MSEERGEPVG GVSGSLLYQT EGGETRVQVS LFEGTVWLTQ RLIAEVYQKS IRMIDEHIKN 
IYEERELDPQ ATIRKFRIVQ SEGDRQVECL VDFSTLAVIL AVGYRVRSHR GTPFRQWATK
HLREYVVKGF VLDDERLKEA RDYFDELLKR IRDIRASERR FYQKIADISA TSVDYDPKDP
MTLEFFRTVQ NRMHRTIHGH TPAETISLRA DARKPHMGLS TWKQGPKGRI HRTEVGVAKN
TL