| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1485 |
|---|
| Symbol | |
|---|
| ID | 7270090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 1533581 |
|---|
| End bp | 1533922 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643570107 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002466529 |
|---|
| Protein GI | 219852097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAA AACTGGCACA ACCTATTGAG ACGTACTTTT ACGCGTCGAA CATTCCTGAC
AACGAACTGA TTGTGAACTG CTTCACCGAG GACGCCATCG TCCTGGATGA AGGACACACC
TACCGGGGGC ATGCTGCCAT CCGGAAATGG CGGGATGACG TCACCGAACA ATGGACGATC
ACGACCGAAA TTACCGGTGT CGCTGAAAAA GGCGGCGAGA CGGTCGTGAC CGCCACCGTT
TCCGGAAACT TCGACGGGAG CCCGGTTCCT CTTGATTTCC ATTTTACTGT GGAGAACGAA
AAGATCACTG CACTGCGGAT CGTTTTGGCA GGCACAGAAT AA
|
|---|
| Protein sequence | MQKKLAQPIE TYFYASNIPD NELIVNCFTE DAIVLDEGHT YRGHAAIRKW RDDVTEQWTI
TTEITGVAEK GGETVVTATV SGNFDGSPVP LDFHFTVENE KITALRIVLA GTE
|
|---|
| |