Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1477 |
Symbol | |
ID | 7270082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1527283 |
End bp | 1527879 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643570100 |
Product | isochorismatase hydrolase |
Protein accession | YP_002466522 |
Protein GI | 219852090 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.131824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAG ACACAAGATC AACAGATACC GAATTGAAAG CAGAAAAAAC AGCGCTCGTC GTTATCGACA TGCAGAAGGG AATCGTGAAC AGGCAGCATG CCCCTCATAC GAGCGAGCAG GTTGTGTTGA ATGCAAGCAG GTTGGTGCAG GCATTCACGG AGAAGGGAGC CTTTGTCGTT CTTGTGAGAG TCTCAACGGT CGATGGAAGA GATATGTTGA GACCAAGGAC AGATGCCACG ACCAACCCGG TACCATTCCC AGATGGTTGG GATGCCTTCG TACCAGAACT GGAACATTTT GACCAGGTCC ATGTGATCAC CAAGAGACAA TGGGGAGCAT TCTACGGTAC CGACCTTGAC CTCCAGTTAC GCCGCCGGGG GATCGATACG ATTGTACTCT GCGGGATCTC GACCGGGATC GGCGTCGACA CGACAGCACG GGAGGCTTTT CAGCGTGGTT ACGATCAGAT CTTTGTGGAA GATGCAATGA CCGCTTCAAC AGAGGAAGAG CACGAGTATG TCTGTACACA CATCTTTCCC CGGATCGGTC GAATTCGGAC AAGTGAGGAA GTGGTCGGCC TGTTGAGCCA CCCCTGA
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Protein sequence | MMKDTRSTDT ELKAEKTALV VIDMQKGIVN RQHAPHTSEQ VVLNASRLVQ AFTEKGAFVV LVRVSTVDGR DMLRPRTDAT TNPVPFPDGW DAFVPELEHF DQVHVITKRQ WGAFYGTDLD LQLRRRGIDT IVLCGISTGI GVDTTAREAF QRGYDQIFVE DAMTASTEEE HEYVCTHIFP RIGRIRTSEE VVGLLSHP
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