| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1474 |
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| Symbol | |
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| ID | 7270079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1523625 |
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| End bp | 1525631 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643570097 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_002466519 |
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| Protein GI | 219852087 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0914572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA AGTATTTTTT TTATTTTTTC TGCGCCCTGC TCCTCCTCTG TTGCAGCGCC
CAGGCTGTTT CGGTTGAAGG TGGGTACGCA TATGTTACGC AATGGGGCAG TTCTGGTCAA
GAAGCCGGGC AGTTCAACCA GCCCTATGGT GTCACAATTG ACAGCATTGG CGATGTCTAC
GTCGTCGACA CATACAACAA CTGGATCCAG AAGTTCGATT CGAACGGCAC ATTCCTCAAA
AAATGGGGCA GTTTTGGCAC CGGAGACGGG CAGTTCAACA TACCCTATGA TATCGCCGTG
GACAGCGTCG GCTACGTCTA CGTCGCCGAC ATGAATAACA ACCGGATCCA GAAATTCAAT
TCGACTGGTG GTTACCTGAC CCAATGGGGC ACGAAAGGCT CGGAGGAAGG ACAACTCGAC
CAGCCAGGTA GTGTCGCGGT GGACAGCAGA GGACAGATCT ATGTCGCTGA CTGGGGCAAC
AACCGGGTTC AGGTATTCAA TTCGACCGGT GGCTACCTCA TGCAGTGGGG GAGTTCCGGC
TCGGGAGACG GACAGTTCGA CGGTCCGAAT GGAATTGCCA TAGACAGCAC CGGCAATGTC
TATGTCACTG ACGCATACAA CAACCGGATT CAGGAGTTCA ATTCGACCGG TGGCTACCTC
ATGCAATGGG GAAGTTCTGG CTCGGAGGCC GGGCAGTTCG AGATTCCCCA GGGTATCGCG
ATGGACAGTA ACGACAACGT CTACGTGGCC GACTCTGGCA ACCGGGTCCA GAAGTTCACG
TCGGCCGGCA CCTTCATCAC GCAATGGGGT ACGAAAGGCT CGGAAGCCGG GCAGTTCAGC
AATCCCTTTG GTATCGCCGT GGACAGCGCC GACAATGTCT ATATCACTGA CGTGTACAAC
AACCGGGTCC AGAAGTTCAC GTCGGCCGGC ACCTTCATCA CGCAATGGGG CAGTCAGGGT
TTGGAAGTCG GACAGTTCAA CATGCCCTAT GGTGATGCCG TGGACAGTGC AGGCAATGTC
TACGTCACCG ACCTGGGGAA CAGCAGGGTC CAGAAGTTTA CCGCGAACGG CACCTTCATC
ACAGAATGGG GCAGTTCGGG ATCGGGAGAC GGACAGTTCA ACATGCCCTA TGGTATCGCC
GTGGACAGCG CCGACAACGT CTACGTCGCT GATTTGAATA ACAACCGGGT CCAGAAGTTC
AATTCGACTG GTAGCTACCT GACACAATGG GGCATGACAG GCTCAGGGAA CGGACAGTTC
GACCAGCCAT GCGGTGTCGC GGTGGATCGC TTCGGCATCG TCTATGTCAC TGACTTTGGC
AACAACCGGG TCCAGATGTT CACGTCGGCC GGTGGCTACC TCTCCCAATG GGGCAGCCAT
GGTCCGGGAG CCGGGCAGTT CAGCGGTCCG AATGGAATTG CACTGGACAG CACCGGCAAT
GTTTATATCA CAGACTGGGG CAACAACCGG GTCCAGAAGT TCACGTCGAC TGGTAGTTAC
CTCAGGCAAT GGGGCAGTTC CGGCTCGGAA GACGGGATGT TCGGCGACTC AACGAGTGTC
GCCGTGGACC GTGACAGCAA CGTCTACGTG TCCGACAGTA GCAACCACCG GATCCAGAAG
TTCGATCAAA ACGGCACATT CATCACGAAA TGGGGGAGTT ATGGCTTGGA AGCCGGGCAG
TTCAACAGTC CTTTTGGTAT CACGGTGGAT GGTGCCGGCA ACGTCTATGT CACCGACGTG
AACAGCAATA GGGTCCTGAA GTTCGCCCCC ACTGGTACGA CCCCGGTGGT GATCGTCCCG
GGCGGGTCAG CCGTCCCGCA GGATCTCAAC CATGACGGAC TGTACGAGGA CGTCGATGGC
AACGGAGTCC TCGACTTTGG TGACGTGGTC CTCTTCTTCA ACCAGATGGA CTGGATCGCC
GAGAATGAAC CGATCAGTGC GTTTGATTTC AACAAAAACG GTCAGATCGA TTTCAATGAT
ATTATCACCC TGTTCAACGA GTTGTAG
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| Protein sequence | MKFKYFFYFF CALLLLCCSA QAVSVEGGYA YVTQWGSSGQ EAGQFNQPYG VTIDSIGDVY
VVDTYNNWIQ KFDSNGTFLK KWGSFGTGDG QFNIPYDIAV DSVGYVYVAD MNNNRIQKFN
STGGYLTQWG TKGSEEGQLD QPGSVAVDSR GQIYVADWGN NRVQVFNSTG GYLMQWGSSG
SGDGQFDGPN GIAIDSTGNV YVTDAYNNRI QEFNSTGGYL MQWGSSGSEA GQFEIPQGIA
MDSNDNVYVA DSGNRVQKFT SAGTFITQWG TKGSEAGQFS NPFGIAVDSA DNVYITDVYN
NRVQKFTSAG TFITQWGSQG LEVGQFNMPY GDAVDSAGNV YVTDLGNSRV QKFTANGTFI
TEWGSSGSGD GQFNMPYGIA VDSADNVYVA DLNNNRVQKF NSTGSYLTQW GMTGSGNGQF
DQPCGVAVDR FGIVYVTDFG NNRVQMFTSA GGYLSQWGSH GPGAGQFSGP NGIALDSTGN
VYITDWGNNR VQKFTSTGSY LRQWGSSGSE DGMFGDSTSV AVDRDSNVYV SDSSNHRIQK
FDQNGTFITK WGSYGLEAGQ FNSPFGITVD GAGNVYVTDV NSNRVLKFAP TGTTPVVIVP
GGSAVPQDLN HDGLYEDVDG NGVLDFGDVV LFFNQMDWIA ENEPISAFDF NKNGQIDFND
IITLFNEL
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