| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1473 |
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| Symbol | |
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| ID | 7270078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1521298 |
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| End bp | 1523457 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570096 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_002466518 |
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| Protein GI | 219852086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000967191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCA TGAAAAGAAT GACCTGGCTG CTGGTTGTGC TGGCCATCGT CTCCTGTTTG
TTGATGAATT CGCCGGCAAC GGCCGTGCCT GATTCGTATC TGAGGGGGTA CGTTATTGAT
TCAAGTACTG GGCAGCCGGT GTCGGGTGCG ACAATCTCGA TGACCGGTTC CAATCTCTCA
CCAACCAGTA CGATATCGAA TGGTGATGGG TCCTACTCTC TTGGCCGAAG AGATACAGGC
CTTGGCCTGA AGAGCGGAGA ACGGATCGTC GACGGCAATA ACATTCCCCG TTATGTCGAC
CTGACTGCAG TCAAAGATGG CTATCTGCCC TACGCTTCCA GCGTTGATTT ACGGTTATAC
CAGGTGAGCG GCTATAACAT CTCACTCACG CCGTTCACTG CGAACTTCTA CGCGTTCGGC
CATGTCGGAC AGGCTCCGTA CTCGGTACGG TTCATGGACC AGTCGACCGG CTCGCCGACC
GCCTGGTTCT GGGACTTCGG GGACGGCTCT AACTCAACCG AGCAGAATCC AACCCATGTC
TTCACCAAGA ACGGCGTCTA TAACGTGGCC CTGACCGCCA CCTATGATTG GGGGAGCAAC
ACCTGCACCC AGTACCGGTG TATCATTGTG AACTCAGTAC CTGTTGCGGC CTTTACGGCC
AATGCGACGT CTGGTCGGAC GCCCTTCACG GTCCAATTCA CTGACCAGTC CTCAGATGCA
AACGGATACC AGTGGCAGTT CGGCGATGGG ACCACGTCGA CCGAACAGAA CCCTATCCAC
ACCTACACGA GCCCGGGGAC CTATACCGTG ATGCTGACAG TATCAGTACC TGACTATGGC
AGTGTCTTCA TCCAAAAGCC GGGGTACATC ACGGTCACCG AACCGTCATC GGTCGATTTC
GCTGCGAACG TGACTGCCGG TTTATCTCCC CTTGCCGTGC ATTTCAACGA GTCGGTAAAC
GGATCGGTTC AGTATTTCTT CTGGCAGTTC GGCGACGGTT CGACCTCCTC TGAGTCGAAC
CCCGTCCATG TTTATGAGAC GGCCGGCAGG TACACTGTCT CGCTGATGAC CGTCGGTTCC
AACGGGACAG AGGTGAAGAC GATCGAGGAC TACATCAATG TCACCTCGCC GGTGACCCCG
ACGGTCACAC CCACTGCGAC TGCGACTGCG ACTGCGACGG TGACACCGAC CGGAGCCCTG
CCGGTGGCGA ACTTCACGGT CACCTCCAGT GATCAAGACT CGCTCGGCAT CCAGGTCGCC
GATACCTCCG AGAACGCGAC CTCGGTCCGG TACGACCTCG GGGACGGCAC GACCACTGCC
TATCGAACAT TCCGGTACAC CTACTGGCAG GCCGGCACCT ATACCATCGA TCAGACCGCG
ACCAATGCAG CGGGGTCCTC GCATAAGAGC TTTGCTGTGA CCGTGCCGGC TACCACCTTC
CCGCCAGTGG GAGGAGATCA GGGATGGTAC ACTGTCCACT GTAATGTGGA CGGAGCATCG
GTCCTCTTCG ACCAGACCCC GATGGGGACA ATAGCAGGAG GGATCCTGAA GGTCAAAGTC
TATACGACCG CGACCCCGTA CTACACCTAC ACCGTCAGTA AGGACGGGTA CGCCACCTTC
CAGGGTACGA TCACCACTCA CCCGGGAAAG GACCAGAACG TCGACCTGAC CGCCCAACTG
ATCCCAATAG CCGGCCAGGT CTACAACGGG CCACATACGA TCCCCGGGAC GTTACAGGCT
GAGGACTATA ACATCGGTGG CGAAGGGGTC ACCTATCACG ACACCACCGT CGGAAATGAG
GGTGGTGCGT ACCGGCAGGA CGACGTGGAC ATCGAGGTGC TCGATACTGA TGGGTCGCCG
AATGTCGGCT GGATCCGTGC CGGCGAATGG CTGACGTACA CAGTGAATGT CAGCACTGCC
GGCACCTATG ACGCCGGGTT CAGGGTCGCA TCCACCCACA GTGGTTCATC CGTCCTGGTG
TATGTCGACA ACGGCACGAC CCCGGTCGCA ACGCTGAACG TCCCGAATAC CGGGGCCTGG
CCGGTCTTCC AGACCATCTC GGTGCCGGTG ACCCTGCCGG CCGGGCAGCA TCAGTTCGTG
TTGAAGTTCC CGACCGACTT CGTCAACATC AACTGGATCA GGTTCGCCTT GAGGGGCTGA
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| Protein sequence | MSLMKRMTWL LVVLAIVSCL LMNSPATAVP DSYLRGYVID SSTGQPVSGA TISMTGSNLS
PTSTISNGDG SYSLGRRDTG LGLKSGERIV DGNNIPRYVD LTAVKDGYLP YASSVDLRLY
QVSGYNISLT PFTANFYAFG HVGQAPYSVR FMDQSTGSPT AWFWDFGDGS NSTEQNPTHV
FTKNGVYNVA LTATYDWGSN TCTQYRCIIV NSVPVAAFTA NATSGRTPFT VQFTDQSSDA
NGYQWQFGDG TTSTEQNPIH TYTSPGTYTV MLTVSVPDYG SVFIQKPGYI TVTEPSSVDF
AANVTAGLSP LAVHFNESVN GSVQYFFWQF GDGSTSSESN PVHVYETAGR YTVSLMTVGS
NGTEVKTIED YINVTSPVTP TVTPTATATA TATVTPTGAL PVANFTVTSS DQDSLGIQVA
DTSENATSVR YDLGDGTTTA YRTFRYTYWQ AGTYTIDQTA TNAAGSSHKS FAVTVPATTF
PPVGGDQGWY TVHCNVDGAS VLFDQTPMGT IAGGILKVKV YTTATPYYTY TVSKDGYATF
QGTITTHPGK DQNVDLTAQL IPIAGQVYNG PHTIPGTLQA EDYNIGGEGV TYHDTTVGNE
GGAYRQDDVD IEVLDTDGSP NVGWIRAGEW LTYTVNVSTA GTYDAGFRVA STHSGSSVLV
YVDNGTTPVA TLNVPNTGAW PVFQTISVPV TLPAGQHQFV LKFPTDFVNI NWIRFALRG
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