| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1444 |
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| Symbol | |
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| ID | 7270049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1491471 |
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| End bp | 1492910 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643570069 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002466491 |
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| Protein GI | 219852059 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC ACCAGACATT GGTCCCTGCG AGGACAGTAT ATCTGTTAAT TGCAGCTCTT
CTGCTGCTTG TCGGTACTGC CAGCGCTGCA GCCCCGATAG CGGCGTTCAC CAGCACGCCG
GCTTTCGGCA CCGTCCCCCT GACCGTGAAC TTCACCGACA CCTCGACCGG CAGTCCGACC
GGCTGGGCAT GGTTCTTCGG CGATGAGACC TATACGCAAC CGTGGATAGA ACAGAATACG
AGTTCCGGAT GGTCGAAGCG AGGGTATATC CGAAGTGTGG CGATGCCGGA CGGAAGCATT
GTGCTGATGG GCGGTTACGG CAACAGTACC TATCTGAACG ACACCTGGCG GTCGACCGAT
AACGGCAAAA CGTGGACAGA GCAGAACCCG AGTTCCGGGT GGTCGGGACG AGCCGAACAG
AGCTGTGTCG CGATGCCAGA CGGGAGTATC GTGCTGATGG GCGGTTACGG CAACGGTACC
TTTCTGAACG ACACCTGGCG GTCGACTGAT AACGGCAGAA CGTGGACAGA GCAGAACTCG
AGTTCCGGGT GGTCGGGACG AATCGAACAG AGCAGTGTCG CGATGCTGGA CGGAAGCATC
ATACTCATGG GCGGGTATGA CGGGAACAGC AATCAGAACG ATGTGTGGCG GTCGACCGAT
TTCGGTGTAA CCTGGACACA GTTACCGGAT GCCGCGTGGT CGCCGAGATC CTGTTTCACC
GTCGTCGTGA CGCGGGACAG CAGCATCGTA CTCACGACCG GCGTCGAATT AGATGGCACC
TGGAAGAATG ATGTGTGGCG GTCGACCGAT GGGGGTCTCA CCTGGACTGA GATGACCCCG
AGTGCCAGTT GGGAGGAGAG GAGATGGCAT GGATGCGTCG CGATGCCGGA CGGGAGCATT
GTGCTGATGG GCGGTGATGG GCCCGTCGGT TGGAATGATG TGTGGCGGTC GATCGATGAC
GGTGCAACCT GGACGCAGTT GCCGGATGCC GCGTGGTCGC CACGGGCCCG TTTAGGCTGT
GTGGCGATGA CGGATGGCAG CATTGTGGTG ATGGGGGGTG GAGGCCAGAA CGATACCTGG
CGGTTCCAGC CCGCAGGATC AACACTCCAG AACCCATCGC ACACCTATAC GACTGCGGGT
ACCTATTCGG TAGCATTGCA GGCGTTCACT GCGGCCGGGT ACAGCAGTAC GCACCAGGTC
TCGGTCGCCG TCGTCCCGAT GCCGTCGATA TCCCCCTCGG TCAACACTCC TCAGGACCTC
AACCATGACG GGCTCTACGA GGATCTCGAC GGCAACGGTG TTTTCGACTT CAATGACGTG
GTCCTCTTCT TCAACCAGAT GGACTGGATC GCAGATTACG AGCCGGTCAC TGCATTCGAC
TTCGACAGAA ACGGCCGGAT TGATTTCAAT GATATCGTTG TATTGTTTAC TACCCTGTAG
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| Protein sequence | MNDHQTLVPA RTVYLLIAAL LLLVGTASAA APIAAFTSTP AFGTVPLTVN FTDTSTGSPT
GWAWFFGDET YTQPWIEQNT SSGWSKRGYI RSVAMPDGSI VLMGGYGNST YLNDTWRSTD
NGKTWTEQNP SSGWSGRAEQ SCVAMPDGSI VLMGGYGNGT FLNDTWRSTD NGRTWTEQNS
SSGWSGRIEQ SSVAMLDGSI ILMGGYDGNS NQNDVWRSTD FGVTWTQLPD AAWSPRSCFT
VVVTRDSSIV LTTGVELDGT WKNDVWRSTD GGLTWTEMTP SASWEERRWH GCVAMPDGSI
VLMGGDGPVG WNDVWRSIDD GATWTQLPDA AWSPRARLGC VAMTDGSIVV MGGGGQNDTW
RFQPAGSTLQ NPSHTYTTAG TYSVALQAFT AAGYSSTHQV SVAVVPMPSI SPSVNTPQDL
NHDGLYEDLD GNGVFDFNDV VLFFNQMDWI ADYEPVTAFD FDRNGRIDFN DIVVLFTTL
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