| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1421 |
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| Symbol | |
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| ID | 7270026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1463510 |
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| End bp | 1466302 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643570051 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_002466473 |
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| Protein GI | 219852041 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.368909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTT CATATTCTTT GTATATTATC TGTGTCCTGT TCCTCCTCTG TAGCAGCGTC
CAGGTCGTTT CGGCTGAAGG AGGGTATGCG TACGCCACAC AATGGGGCAG TTCAGGTTCT
GGAGATGAAC AGTTCTCCTC TCCATCTGGT GTTGCAGTGG ATAGCGTCGG GAACGTCTAC
GTCGCTGACG TGGGCAACAA CCGGATCCAG AAGTTCACGT CGACCGGGAC CTTCATCAAA
AAATGGGGCA GTTCAGGTTC TGGAGATGGA CAGTTCTCCT CTCCATCTGG TGTCGCAGTA
GATAGTGCTG GTAATGTCTA CGTGGCTGAC ACGGGAAATA ACCGGATCCA AAAGTTCACG
TCGATGGGGA TATTTATCAA ACAATGGGGC AGTTCGGGTT CTGGAAACGG ACAGTTCTTC
TCTTCTCCAT TTGGTGTCGC AGTAGATAAT GCTGGTAATG TCTACGTGGC TGACACGGGA
AATAACCGGA TCCAGAAGTT CACCTCTGAT GGTGCGTTTG TCACCAATTG GTGGGTGAAC
GAACCAAATG GACCAGATGG TGTTACAGTG GATAGCGCCG GCAATGTCTA TGTGGTTGAC
GTATCCTATA TTGACCGGGT TCAGAAGTTT ACATCATCTG GCACGTTCAT CGCGAAATTT
GGCAGTGATT ACATTCATGA CAGCGCAATG AGTTATCACA CTAGTGTCGC AGTGGACAAC
GCTGGAAATG TATACTTCAG GGGGCCTGTT AGTGGAATCC AAAAGTTCTC GTCGACTGGG
GCACCTATAA CAAAATGGGG TAATTATGGT TCAGGAATGT ACTATGGTCC GGGTGATGTG
GCAGTGGACA GCACCGGAAA TGTATATGTC AGCGACACCC AGAATGCTCA GATTGTAAAG
TTTACCCCTG ATATCCCTCT CATTCCCGGT TTCACCGCGA CACCGACCAC AGGCGCCGCC
CCGCTGACTG TGCAGTTCAC TGACACCACA ACCGGGAGAC CGACCTCCTG GTACTGGAAT
TTCGGGGATG GGTACGCCTC CGGTGCTCAG AACCCGAGCC ATCTGTATAG TACTGCCGGC
ACTTACTCGG TCACGCTGAC TGCCACCAAT GCTGTTTCGG GGAGCAAATC GATCACAAAG
ACAGGGTACA TCACCGTCAC AGAAGCCCCA GCCATTACAC CGGTCGCAGA CTTCACGGCA
ACCCCATCCA ACGGTGCTGC ACCATTGGCA ATCCAGTTCA CTGACCGGTC GACAAATGCA
AAACAGTGGT CCTGGACCTT CGGCGACGGC ACAACCTCGA CCGAGCAGCA CCCCTCACAT
ACCTACACCA CTGCCGGTAC ATACACCGTC GTGCTCACCG TCAGAAATGC AGCCGGCCAA
TCGAACACCA AGACCCAGAC GAACCTGATC TCAGTTACAT CCCCAGTCAG TGAAACACCG
GCTGCAGACT TCACGGCCAC CCCGACATCG GGAACCGGCC CGCTCACCGT CAGGTTTACA
GATACCTCAA CCGGTGTCCC GACAGGCTGG TACTGGTTCT TTGGGGATGG TTACTGCGCA
TTCGAGAAGA ACCCCTCACA CATCTTCGCA CAGGCCGGCA CCTATACGGT ACAGCTCTAT
ACGTTCAATG CAAACGGTAA CTCGCTGAAG ACAAAGACGG ACTATATTAC GGTCAGCGCG
GTCGGTGGGC TTAATGCAAG TTTTGCTGCC ACGCCGACCT CGGGGACAGC CCCTCTTAAC
GTTCAGTTCA CAGACACGTC GACTGGAGGA GCGACCTTCT GGTCCTGGAA TTTTGGTGAC
GGGGCAGCCT CCACTGATCA GAGTCCGAGC CACACCTACT CTCTGGCTGG CACGTACACG
ACCTCATTGA CAGTCCGGAA CAGTTCTGGT CTGACGAGCA TCAAGGAAGG GACGATCACC
GTCACCGCCC CACAGCAGAC CCTCCAGGCA GCGTTCACGA TTAATACGCA GACTGTGATA
GCCGGGCAGA CAACAGTAAC CGGCATCGAT ACATCCACCG GGTCCCCAGC CACCTGGTAC
TGGGACTTTG GTGATGGGTA TGCGTCATCG GCCCGGAACA TCAACCACGT CTACACCACC
GCCGGCTCGT ACACCCTGAG TCTGACCGTC ACGAGCGGCT CACAGACCAG CACGACCAGC
AAAACGATCA CCGTAACCGG TGAATCTGTA ATAACACCTC TGGCCAATTT CACGGTCACA
CCCCAGGGGG GAGTCGGCTC GATGGGTATC CTGGTCCTCG ACACCTCGGT GAACGTGACC
TCGGTGTTGT ATGACCTCGG CGACGGCACG ACCACCACCT ATTCGAACTT CCGGTACACC
TACTGGCAAC CTGGCACGTA TACGATCAAA CAGACCGCGA CCAGTGCAAC CGGGTCCTCG
ATAAAGACGA TTACCGTGAC CGTACCAGCC ACGAATTCAC CGGTCTCACC GACGGTAACC
ATGACTATGA CCCCGACCGT CTCACCAACA GGGACCGTGA GTGTGACCCT GACTCCCACT
CCAACCGATC AACCCCAAAC CAGGGCAGCA AGCTTCAACG TTAGTCCGAC CTCCGGCAAG
AGATCATTCA CTACTGCACT CATAGACACC ACTACCGGCG GTAACCCAGT CTCCTGGAAG
TGGACCTGTG GAAACGGGCA GTCCTTCTCT GGGAAGAGTG TTGGTTTAAA CAGAATCTGG
TACAACAATG CAGGTACCTA CACCATCATC CTGACCGTGA CAGATCAGGA CGGTTCAACA
AGGACCGCCA CGCATACTGT CACTGTCCTG TGA
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| Protein sequence | MKSSYSLYII CVLFLLCSSV QVVSAEGGYA YATQWGSSGS GDEQFSSPSG VAVDSVGNVY
VADVGNNRIQ KFTSTGTFIK KWGSSGSGDG QFSSPSGVAV DSAGNVYVAD TGNNRIQKFT
SMGIFIKQWG SSGSGNGQFF SSPFGVAVDN AGNVYVADTG NNRIQKFTSD GAFVTNWWVN
EPNGPDGVTV DSAGNVYVVD VSYIDRVQKF TSSGTFIAKF GSDYIHDSAM SYHTSVAVDN
AGNVYFRGPV SGIQKFSSTG APITKWGNYG SGMYYGPGDV AVDSTGNVYV SDTQNAQIVK
FTPDIPLIPG FTATPTTGAA PLTVQFTDTT TGRPTSWYWN FGDGYASGAQ NPSHLYSTAG
TYSVTLTATN AVSGSKSITK TGYITVTEAP AITPVADFTA TPSNGAAPLA IQFTDRSTNA
KQWSWTFGDG TTSTEQHPSH TYTTAGTYTV VLTVRNAAGQ SNTKTQTNLI SVTSPVSETP
AADFTATPTS GTGPLTVRFT DTSTGVPTGW YWFFGDGYCA FEKNPSHIFA QAGTYTVQLY
TFNANGNSLK TKTDYITVSA VGGLNASFAA TPTSGTAPLN VQFTDTSTGG ATFWSWNFGD
GAASTDQSPS HTYSLAGTYT TSLTVRNSSG LTSIKEGTIT VTAPQQTLQA AFTINTQTVI
AGQTTVTGID TSTGSPATWY WDFGDGYASS ARNINHVYTT AGSYTLSLTV TSGSQTSTTS
KTITVTGESV ITPLANFTVT PQGGVGSMGI LVLDTSVNVT SVLYDLGDGT TTTYSNFRYT
YWQPGTYTIK QTATSATGSS IKTITVTVPA TNSPVSPTVT MTMTPTVSPT GTVSVTLTPT
PTDQPQTRAA SFNVSPTSGK RSFTTALIDT TTGGNPVSWK WTCGNGQSFS GKSVGLNRIW
YNNAGTYTII LTVTDQDGST RTATHTVTVL
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