| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1402 |
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| Symbol | |
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| ID | 7270007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1447992 |
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| End bp | 1448741 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643570033 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002466455 |
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| Protein GI | 219852023 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGAT TAAACAACAA AGTCTGTATT GTCACCGGAT CCACCAGCGG TATCGGTGAA
GCATGTGCGA AAGACATGGC AGCTGAGGGC GGCAAGCTCG TGGTCTCCGG CCGGAACGAG
AAAGAGGGCG CCAGGGTCGT CAACGAGATC AAGGCAATGG GGGGCGAGGC GATCTTCGTC
CGGGCGGACG TCGTCAGCGA AGACGATATC AAGAATCTCA TTGCGAAGGC CGTCGAGGCC
TTCGGGAAGC TGGATGTCAT GGTCGCCAAC TCAGGCATCG CCATCCTGGG CGATCCTCAC
GAAGTGGAAG TCGACGACTG GGATAAGGTT CTCAACGTAA ACCTGAAGGG GGTCTTCCTC
TGTGACAAGT ATGCTGTCAT TCAGATGCTG AAACAGGGAA ACGGCGGAGC AATCGTGAAT
ACCGGTTCTA TTCACAGTTT TGTCGCCAAG CCGGGCACCA CTTCGTATGC CGCGGCCAAG
GGCGGGGTCG CCATGCTGAC CAGAACGGTC GGCACCAGTT ATGCGACGAG GGGAATCCGC
GCGAATTTCG TTGCCCCCGG GTATGTGGAC ACCCCTCTTC TCTCAGCCCT TCCGCCGGAG
GTCTACCAAG ACCTAGTAAA ACTGCACCCG ATCGGGCGAC TGGCCAAACC GGTAGAGGTC
GCGAAGGCTG TCACATTCCT TGCGAGCGAT GACGCCTCCG ATATCACCGG CACCAGCCTG
CTGGTCGACG GCGGGTACTC TGCAGTATAG
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| Protein sequence | MGRLNNKVCI VTGSTSGIGE ACAKDMAAEG GKLVVSGRNE KEGARVVNEI KAMGGEAIFV
RADVVSEDDI KNLIAKAVEA FGKLDVMVAN SGIAILGDPH EVEVDDWDKV LNVNLKGVFL
CDKYAVIQML KQGNGGAIVN TGSIHSFVAK PGTTSYAAAK GGVAMLTRTV GTSYATRGIR
ANFVAPGYVD TPLLSALPPE VYQDLVKLHP IGRLAKPVEV AKAVTFLASD DASDITGTSL
LVDGGYSAV
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