| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1352 |
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| Symbol | |
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| ID | 7269957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1397076 |
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| End bp | 1398185 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569986 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_002466408 |
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| Protein GI | 219851976 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.739461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.456479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAACA ACCGACCATT CGAACGGATT GACACGATTT TCCTCGACCG GGTGACCAAG
CGGTACGGCT CGGTAGCAGC GGTGGAGAAC CTCTCGCTTG AGATCGACGG GGGTGAACTG
ATCTGCCTGA TCGGGGGATC AGGCTCAGGG AAGACGACCA CACTCAGAAT GTGTAATCGG
CTCATCGAGC CCGACTCCGG ACGTGTGCTG ATCAACGGGG CCGATCTAAA GACGATCGAC
CCGGTCAGAC TGCGCAGGCA CACCGGGTAC GTGATCCAGT CGATCGGTCT CTTTCCTCAT
ATGACGGTCG GGGAGAACAT CGGGCTGATC CCACACCGTG AGGGATGGGA TGAAGAGCGT
GTAAAAAAAA GGGTCAGTGA ACTGCTCCGG CTGGTCGCCC TCCCCCCGGA GACCTTCCTC
TCCCGGTATC CCCGTGAGCT CTCAGGGGGG CAGCAGCAGC GGGTCGGTCT CGCCCGGGCC
CTCGCGATGG ACCCCCCGCT GCTGCTGATG GACGAGCCGT TCGGGGCACT CGACCCGCTG
CTCCGTCACC AGTTACAGGA TGAGTTTCTT AAGATCAAGC AGGTGATCGG GCGGACGATC
CTCTTTGTGA CCCATGACCT TGAAGAAGCA TTCCGGCTCG GGGACCGGGT GGCCGTTCTC
GATCAGGGAC GACTGGTGCA GGTTGGTACC CCCGATGAAC TCCTCTTCTC ACCTGTCAAC
GCAGCAGTGG CGAATCTGTT CGGTTCCGGG GCAAAGTACA GGCATCTCGA CCGGTTGACA
GTCCGTGACC TGATGAGCCG GGTCCTGGTC CTGGACGGGG GGGTCTCCGC AGGTAATGCC
GCCATCCTGC TCGATCAAAG ACAGAGCTCC ATCGCAGCCA TTGTCTCTGA TGGGGTGGCC
CAGGGGGTGA TCGAGAGAGA CGGGCTGACA GCAGGGGAGC AGGCGATCAG CACCCTTGCC
ACCGATGTTC CGATGGTTGC CGCCAGCGAT GGGGCGGAGG CGACGATCCG GATGCTCAGG
GATCTGGCAG CCCCCTTCGC CCTGGTGATG GAGCACGATC ATCCGGTTGG GATTCTGAAC
CCGGCAGAGG CGCTGCTTTC ACTGGTGTAG
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| Protein sequence | MQNNRPFERI DTIFLDRVTK RYGSVAAVEN LSLEIDGGEL ICLIGGSGSG KTTTLRMCNR
LIEPDSGRVL INGADLKTID PVRLRRHTGY VIQSIGLFPH MTVGENIGLI PHREGWDEER
VKKRVSELLR LVALPPETFL SRYPRELSGG QQQRVGLARA LAMDPPLLLM DEPFGALDPL
LRHQLQDEFL KIKQVIGRTI LFVTHDLEEA FRLGDRVAVL DQGRLVQVGT PDELLFSPVN
AAVANLFGSG AKYRHLDRLT VRDLMSRVLV LDGGVSAGNA AILLDQRQSS IAAIVSDGVA
QGVIERDGLT AGEQAISTLA TDVPMVAASD GAEATIRMLR DLAAPFALVM EHDHPVGILN
PAEALLSLV
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