| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1351 |
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| Symbol | |
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| ID | 7269956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1396164 |
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| End bp | 1397072 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643569985 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_002466407 |
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| Protein GI | 219851975 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.971768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.449459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGG AAATCCTTTT CACGGTTCTT CTGGTCATTG TTCTCGTCAT AGCAGGGTGT
ACTTCCGGGC CAGGGCAGTC TGTCAGTCAG AAGAACACGA CGATTGTTGT CGGAGCAAAG
ACGTTTAACG AACAGTACAT CCTGTCAGAG ATGATAGCAC AGATCCTCAA AGACAACGGG
TACCAGGCCG TGGTGAAGTC CGGGCTGAAC GACGGGACGC TCTTTGAAGG GATAAAGAAC
GGTCAGGTTG GAGTGTACGT CGAATATACC GGGACTGCCT ATTCTCAGCT CCTCAAGCTG
CCGGCGTTGC AGACCTGGGA CCCTGACGTG GTCTCGGCAA AGGTGAAGGA GGGTCTTGCC
GGGGAGAATA TCACGGTTCT CTCACAGATC GGATTCAGGG ATGACTACAC AATCGCAGTC
AGGGAGGACT GGGCAGTGAG CCATAACAAT GTCTCCACCA TCAGCGAGCT CGTCCCGTAT
GCAAAGGACC TTGTCTTTGG GAGCGATCTC GTCTTCCATG AACGCGAAGA CGGGTTGCCA
AGCCTCCAGA AGGTCTACGG GCTCACATTT AAGGACGTGA AACCGATGTC CCCTACCCTG
ATGTACGAGG CGATCAAGAA CGGGCAGGTC GATGTGATCC CACCATATAC AACCGATTCG
AGGGTTGACC TTTACAAACT GCGTACACTC AGGGATGATC GTTCGGCAAT GCCTCCATAC
CATGCGATCC TTCTTGCCAA TGCAGGGCTT GCGAAGAACC CTGGCGTGGT GCAGGCGCTC
GCTGTCCTGA ACGGAAAAAT TGACACGACG ACGATGCGGG AGTTGAACCG GCAGTTCGAT
ATCGATAAGA GGGACGCGCA GGAGATCGCC CATACCTACC TGGTCCAGCA GGGGATCATC
AAGGGCTGA
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| Protein sequence | MKKEILFTVL LVIVLVIAGC TSGPGQSVSQ KNTTIVVGAK TFNEQYILSE MIAQILKDNG
YQAVVKSGLN DGTLFEGIKN GQVGVYVEYT GTAYSQLLKL PALQTWDPDV VSAKVKEGLA
GENITVLSQI GFRDDYTIAV REDWAVSHNN VSTISELVPY AKDLVFGSDL VFHEREDGLP
SLQKVYGLTF KDVKPMSPTL MYEAIKNGQV DVIPPYTTDS RVDLYKLRTL RDDRSAMPPY
HAILLANAGL AKNPGVVQAL AVLNGKIDTT TMRELNRQFD IDKRDAQEIA HTYLVQQGII
KG
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