| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1342 |
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| Symbol | |
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| ID | 7269947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1384256 |
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| End bp | 1387015 |
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| Gene Length | 2760 bp |
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| Protein Length | 919 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643569976 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_002466398 |
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| Protein GI | 219851966 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.766214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGA TCTCATCCAC ACGGAGGCGC CCCTGCGCCC TGGCACCGGC GGTCATACTG
CTGCTGGTGC TCTGCCTGCT CGCCGGAGGT GCACAGGCCG CGACCGATCC CATGGACACG
GCCGCGAACG CGACGATCGA GCCGACGCCG GTTCAGGTGC CGGCTGCAAA AGTTCTCGCT
CCCTACTCGG GCATCCACAC CGTCCCGGGT CAGGTTCAGG CCGAGGACTA CGATCTCGGC
GGCGAGGGGA TCGCCTACCA CGACACCACC CCCGGCAATG AAGGGGGAGT CTACCGGCAG
GACGATGTCG ACATCGAGAC CGCCGGCGGG ATCACCGATA TCGGCTGGAT CCGTTCCGGC
GAATGGCTCG CCTACACCGT GAACACGACC ACGCCACAGA CCGTCGTCCT CCGGCTCTCG
GCCGCGAACC CGGACGCGAC CATAAAGCGG GTCACCATCT CGACGAATGG CACGACCGCC
GGGACGATCG ATCTCCGGCC GACCGGGTCC TTCAACACCT TCCTCATCCA CGACTCGACA
CCCTTTTCGC TCCCCGCGGG AGCGACCACG GTCAGGCTCT TGTTCGACGG TATCGCACGG
GTCAACCTCG ATTACCTCGA CTTCGAGCTG CCGGCGACGC AGGAACCGAC ACCCGTCCCG
ACACCGACGC CGGAACTCCT CATCTCCACA CCCGGCCTCC ACACTCTCGG CGGTGACCTC
TCGGCCGACG GGATCGGGGT CCTGATCACG AGTTCGGACG TCATCCTCGA CGGCATGGGC
CACAGTATCG TGGGAACCAG CGCGAATGGC TCGATCGGCG TCTACGCCAC CAGCCTCGCC
ACCCCGACGT CGTCCGGCCC CATCACGAAC GTCACCGTCC GGAACCTTTC CGTCCGCCAC
TGGGACGAGG GGATCCAGGT CGGCGAAGCA TCGGAGACCG TGGTCGAGGA GGTCGTCGCC
GAGCAGAACC GCATCGGGCT CAGTTATGGC CCCCAGGGGG GGATCACTCA TGACCACGTC
GTCCGCAACT CCGTCCTTCG GGAGAACACC AATCTCGGGC TTGACCTCTC CTACCCGGCC
GGGGGCTTCG CGGTCGAACG GTGCTCGATT ACTGGAAACA GCGTGGGTAT AAACGCCGAT
ATGGTCAGGT CGAGCGAGCG CACCACAAAC CACCTTGCCG ACTGCGACGT CTCGGAGAAC
GCCGGCGACG GCCTCACCAG CAAGGACGGC TCCTTCGTGG TCGTCCAGAA CTGCACCTTC
CGTGCCAACG GCGGCAACGG CCTGGAGTTC GAGCACGGCG GTGCCGAGAT CGTCGGCAAT
CACATCGAAG AGAACGCCGG CGACGGCGTG CATGCGTCCG ATCGCGGCGG GTCAAATATC
CATGGCAACT GGATCACTGG CAACGGCCGG GGGATCGTCG TCGGCGGCGA CTGGGGGTCC
CGCGTCCGGA ACAACTATCT GAACAACACT AACAACGGCT TTTTCGGGGC AGTCGAGGCC
GGGATGATGA ACTACGAGAA GACAGGTGGC GCGAACATCG TCGGCGGCCC GTACCTGGGC
GGCAACTTCT GGGCCAGCCC GAACGGCACC GGTTTCTCGG AGACCCACCC GGACGCTGAC
CACGACGGCA TCTGCGACGT CCCCTACGTC GTCAATGCGG AGGATGGCGT CACCGACTTC
CTGCCGCTCG CACCGTCGCC CGGCACGCCG GTGATCGCTC CGGCCCCGTA CACGCAGCAC
CTGGTCCCCG GCAGGATCGA GGCCGAGGAC TACGACCTCG GCGGGGAGGA GATCGCCTAC
CACGATACCA CGCCCGGCAA CACCGGTGGG GCATACCGCC AGGACGACGT CGACATCGAG
ACCACCGGCG GGATCACCTA TGTTGGCGGA ATCCAGGACG GCGAGTGGCT CATCTACACG
CTGAACGTCC CAGAGGGCGG GGCCTACCTT ATGACCGCCC GTGTCGCGAC CCCGAACGAA
GGATTGATGG CGAGGATCTC GGTCAACTCG GAGACGATGT TCGCTCTCAT CAGATTCCCG
GAGACCGGGT CGTTTACGAC CTACACGACG GTGGAGGCAA AGTACATTTA CCTGCCGGCC
GGGAATACCA CCGTACGGCT GACCTTCCAG GGCGACGGTC TGAACCTCGA CTGGATCGCG
TTCTCACCGC AGGATATCGT CACGCCAACA CCGAAACCGC TCGTCGCTGT CCCCGGCGGC
GCCGGCACCC CCTCTGATAC GAACGCCGAC GGGAAATATG ATGATGTGAA CGGCGACGGG
AGATCTGACT TCAATGACGT GGTCCTCTTC TTCAACCAGA TGGACTGGAT CGCTGAGAAT
GAGCCGGTCG CCGGATTCGA CTTCAGCGGG AACGGACAGA TCGATTTCAA TGACGTGGTA
TGGCTCTTCA ACAACTTCGA CGCCCCGCCG GTCAGAACCT ATAATGTCAC GGCCGTTGCG
ATCGGCCCAG GCACGATCAC GCCCTCAGGG AGGATCTCGG TTCCGGAGGG TGAGAACGTC
ACCTTCATTA TGACGCACGA AAACGCCATG CCGACGCCGT ACAGCACCCA GAGCGGCTAT
GGTAGCGGTA ATCTCGTGCT CGTGGACCCA GCCATGACAC CGACGCCGTT TCCAGAGCCG
GAGCCAGGGG CCCCATGGGT ACCCAATCCG AGTACCTTCA CGCCATCGTA CACCCTGTAT
GACGTCCGGT CTGACCATAC CGTCTACAGT AGTTTCTACT ATGTGATGAT CGTCGCCTGA
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| Protein sequence | MDQISSTRRR PCALAPAVIL LLVLCLLAGG AQAATDPMDT AANATIEPTP VQVPAAKVLA
PYSGIHTVPG QVQAEDYDLG GEGIAYHDTT PGNEGGVYRQ DDVDIETAGG ITDIGWIRSG
EWLAYTVNTT TPQTVVLRLS AANPDATIKR VTISTNGTTA GTIDLRPTGS FNTFLIHDST
PFSLPAGATT VRLLFDGIAR VNLDYLDFEL PATQEPTPVP TPTPELLIST PGLHTLGGDL
SADGIGVLIT SSDVILDGMG HSIVGTSANG SIGVYATSLA TPTSSGPITN VTVRNLSVRH
WDEGIQVGEA SETVVEEVVA EQNRIGLSYG PQGGITHDHV VRNSVLRENT NLGLDLSYPA
GGFAVERCSI TGNSVGINAD MVRSSERTTN HLADCDVSEN AGDGLTSKDG SFVVVQNCTF
RANGGNGLEF EHGGAEIVGN HIEENAGDGV HASDRGGSNI HGNWITGNGR GIVVGGDWGS
RVRNNYLNNT NNGFFGAVEA GMMNYEKTGG ANIVGGPYLG GNFWASPNGT GFSETHPDAD
HDGICDVPYV VNAEDGVTDF LPLAPSPGTP VIAPAPYTQH LVPGRIEAED YDLGGEEIAY
HDTTPGNTGG AYRQDDVDIE TTGGITYVGG IQDGEWLIYT LNVPEGGAYL MTARVATPNE
GLMARISVNS ETMFALIRFP ETGSFTTYTT VEAKYIYLPA GNTTVRLTFQ GDGLNLDWIA
FSPQDIVTPT PKPLVAVPGG AGTPSDTNAD GKYDDVNGDG RSDFNDVVLF FNQMDWIAEN
EPVAGFDFSG NGQIDFNDVV WLFNNFDAPP VRTYNVTAVA IGPGTITPSG RISVPEGENV
TFIMTHENAM PTPYSTQSGY GSGNLVLVDP AMTPTPFPEP EPGAPWVPNP STFTPSYTLY
DVRSDHTVYS SFYYVMIVA
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