Gene Mpal_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1335 
Symbol 
ID7271196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1373795 
End bp1377136 
Gene Length3342 bp 
Protein Length1113 aa 
Translation table11 
GC content50% 
IMG OID643569969 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002466391 
Protein GI219851959 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver
[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGTG TCCTCTATGT TGATGATGAG CCGGCACTTC TGGAACTCGG GAAAATTTTT 
CTCGAGATGT CAGGTTTTAT CACAGTAGAG ACCGCCCTCT CCGCACAGGA GGGTATCCAG
GTGCTGAACA GAACTGTCTT TGACTGTATC GTCTCCGATT ACCAGATGCC AGGAATGGAC
GGTCTCGCAT TTCTCAAATA CTTACGAGGA GAGCATAACG GGATCCCGTT CATTCTCTTC
ACCGGCCGGG GACGTGAGGA AGTGGTGATC GAAGCGGTGA ACAGTGGTGT GGATTATTAC
CTCCAGAAGG GTGGTGATCC CACGTCCCAG TATGTCGATC TGCAGCATAA GATCAAACTG
TCGATAGAAC GTCGACGTAC TGAAGATGAA CTGAAAGAAT CCCGACAACA GATGACAGAC
ATCATCGACC ACCTGCCGGA TGCCACCTGT GCCGTTGACC TGGATGGGAA GATTATCGCA
TGGAACCGGG CCATGGAGGA GATGACCGGG GTACAAAAAG AGCAGATACT GGGAACAGGG
GATCATTCCT ATGCTCTTCC ATTTTACGGC ACGAGAAGAC CGATCCTCCT CGACCTCATA
TTAAGGAACG ATGAAGAGAC CTGGAAAAAA TATCCAAATA CCTTCAAAGA AGACAATAAA
CTGATCTCAG AGATCTATAT TCCCATCCTC TATGGCGGAA AAGGTGCTTA CCTCTGGTTT
ATCGCCTCTC CGCTCTATGA TACGCACGGC ACCGTCATTG GGGCAATTGA GTCCATCCGG
GATGTCACCG AGCGGAAGCG GCAGGATCAC ATCCTCCATA CCCAGCTGGA CCTTGGTCTT
GCACTCCAGT CGATCAGAGG GCTGCATGAT GCGCTGGAGA TCTGTCTATC TGCAGCGATT
GAGATCTCCG GCATGGATGC CGGGGGCATC TATCTGGTCG ATGAGGTGCA TGGCTCTCTC
GATCTCGCTG TTTCACGGAA TCTCGGGGAC GAGTTCGTAC TAAGTGTCTC CCATTATTCG
GCAGATTCCC CCAATACCCG GATAGTGATG ACGGGAAAAC CGATCTATAT CCAGTACAAA
AAAACAGGGA TCGTCCATAG TCCAGTCCAG GAACAGGAAG GTCTGAAGGG GTTAATAATC
ATCCCGGTCA TGTCCATGGG TAGGGTGATC GCCTGTATCA ATATTTCCTC CCATATTTTT
GACGAAATCC CGGCAAATTC CCATATTGGC CTTGAAACGA TCGCTACCCA GATTGGGGCG
GCCATCGTGC GAATCCAGGC GGACGAAGCG CTTGCACAGA GCGAGCAGAA GTACCGGAAC
GTGGTCGAAG ACCAGACTGA ATTTATCTCC CGTTTCTTAC CGGATGGAAC GCACGTCTTT
GTCAACGAGG CATACTGCAG GTATTTCCAA AAGTCGTCTG CTGAGATCAT CGGGACGACG
TTCACTCCGC AACAGCCTGC AGAAGACCAG AAAGCGGTAC GGCAGCACAT CAGGGGATTG
ACACAGGAGA AGCCGGTAGC AACGATGGAA CACCGGATCG TCATGCCGGA CGGGCAGATC
AGATGGCAGC AATGGAGTGA CCGGGCGATC TTTGATGAGG ATGGGGATCT TGTAGAATAC
CAGTCAATCG GACGGGACAT CACCGATAGG AAGATGGCCG AGGACGGACT GAATACCGCC
TATAAGCAGA TCACGGCAAC AGAAGAAGAG TTGCGTGAAC ACTATGACAA ACTGAAAAAT
AGTGGGGATG CACTCCGTGA GAGTGAAGAG AAATACCGGA GCATTCTAGA AAATATTCAG
GATGTCTACT ACCGAAGCGA CACTGCGGGA AACCTCATAC TGGCAAGCCC CTCTGCAAAA
CAACTGTTAG GGTACGACTT AGAATCAGAG GTGAAAGGGA AGAATATTGC GCAGTCTCTC
TATTACTATC CGGAAGAACG CGAAAAATTC CTTGCAGAAC TGGACAGCAG GGGATCAGTC
ACCGATTATG AAGTCACGTT GAAAAAGAGG GACGGAACAC CGGTACCTGT CTCCACGAGC
AGTCATAACT ACTATGATGC AAACGGCAAT CGCCTCGGTG TTGAGGGAAT CTTCCGGGAC
ATCACAGAAC GTAAGAAGAT GGAAGATTCG CTCAAAGCAA ATGAGGAGAA CTACCGATCT
CTGGTTGATA ACCTCAATGT GGGGGTCTAC CGGAACACCC CAGAATTCCC TGGCAGGACG
ATCTGGGCGA ACCAGGCATT TGTCAGGATA CTTGGATATG ATTCTTTACC TGAACTGTTG
GAACACCCGG TCGCCGATAT CTATGCCAAT CAGGATGAGC GGAAAAAGAT CATTCAGGTC
CTGGATACAG AGGGTTCTGT CAGGGACAGG GAACTGCACC TGAAGAAGAA AGACGGTACG
CAGATCTGGG TTTCAATCAA TGCACAGACA AAAAAGAAGT CGGATGGGAC GATTGAATGG
ATTGACGGGA TCTGTGACGA TATCACTGCA TTAAAGGAAG CAGAGGAGAA GGGCAGGCGA
TATCAACTCG AGATATCAAG GACCATTGAT TACCTGCCTG ATGCCGCCTT TATAATCAAC
CGGAAGGGAA CGGTTATTGC ATGGAACCGG GCGATTGAAG AGATGACCGG GGTCAGAGCA
GAGGAGATCG TCGGCAGGGG AGACTATGAA TATGCCATCC CGTTTCATGG ACACCGCCGG
CCGATCCTGA TCGATCTTAT CTTTGCATTA GAGGATGCAG TACAAAAAGG AGATTACGTT
GAGATAAAAC GGACCGGGGA GATCCTCTCC GTCGAGAGTC CCAATCTGAT ACTCAAAGGT
AAACCTTCGA TTGTAAGGGC CATTGCAGCT CCGATCTATG ACGAATCCGG AAATGTCGCT
GGTGCCATCG AAACGATCAC TGATATCACC GAATTAAAAC GGGCTCAGGA AGATCTTCGG
GTGTCGGAGA ACAGATATCA TACCATCTTT GAGAACACCG GAACTGCTAC CGTCCTCCTT
GAGGAGAACA CCACAATATC CCTGGCCAAT GCTGAATTCG AGCGACTGTC TGGATATTCA
AGAGAGGAGA TTGAGGGGAA AATGAGCTGG ACTGAATTTG TTTTTCACGA GGATCTTGAG
AGAATGTTCA CCCAGCACCA CCTGCGTCGG GAGAGGAATG AGACTGCCCT GAGACATTAC
GAGTTCCGGT TTATTACAAA GACAGGTGAG ATCCGCAGTA TCGTCCTGAC CATTGATGTA
ATTCCGGGCA CGACGCAGTC TGTTGCTTCC TTAATGGATA TCACCGCCGA GGTCCGTGCA
TCGGACGCCG TGAAACTGGC GAACAAACAC TCGATCTCAT AA
 
Protein sequence
MYRVLYVDDE PALLELGKIF LEMSGFITVE TALSAQEGIQ VLNRTVFDCI VSDYQMPGMD 
GLAFLKYLRG EHNGIPFILF TGRGREEVVI EAVNSGVDYY LQKGGDPTSQ YVDLQHKIKL
SIERRRTEDE LKESRQQMTD IIDHLPDATC AVDLDGKIIA WNRAMEEMTG VQKEQILGTG
DHSYALPFYG TRRPILLDLI LRNDEETWKK YPNTFKEDNK LISEIYIPIL YGGKGAYLWF
IASPLYDTHG TVIGAIESIR DVTERKRQDH ILHTQLDLGL ALQSIRGLHD ALEICLSAAI
EISGMDAGGI YLVDEVHGSL DLAVSRNLGD EFVLSVSHYS ADSPNTRIVM TGKPIYIQYK
KTGIVHSPVQ EQEGLKGLII IPVMSMGRVI ACINISSHIF DEIPANSHIG LETIATQIGA
AIVRIQADEA LAQSEQKYRN VVEDQTEFIS RFLPDGTHVF VNEAYCRYFQ KSSAEIIGTT
FTPQQPAEDQ KAVRQHIRGL TQEKPVATME HRIVMPDGQI RWQQWSDRAI FDEDGDLVEY
QSIGRDITDR KMAEDGLNTA YKQITATEEE LREHYDKLKN SGDALRESEE KYRSILENIQ
DVYYRSDTAG NLILASPSAK QLLGYDLESE VKGKNIAQSL YYYPEEREKF LAELDSRGSV
TDYEVTLKKR DGTPVPVSTS SHNYYDANGN RLGVEGIFRD ITERKKMEDS LKANEENYRS
LVDNLNVGVY RNTPEFPGRT IWANQAFVRI LGYDSLPELL EHPVADIYAN QDERKKIIQV
LDTEGSVRDR ELHLKKKDGT QIWVSINAQT KKKSDGTIEW IDGICDDITA LKEAEEKGRR
YQLEISRTID YLPDAAFIIN RKGTVIAWNR AIEEMTGVRA EEIVGRGDYE YAIPFHGHRR
PILIDLIFAL EDAVQKGDYV EIKRTGEILS VESPNLILKG KPSIVRAIAA PIYDESGNVA
GAIETITDIT ELKRAQEDLR VSENRYHTIF ENTGTATVLL EENTTISLAN AEFERLSGYS
REEIEGKMSW TEFVFHEDLE RMFTQHHLRR ERNETALRHY EFRFITKTGE IRSIVLTIDV
IPGTTQSVAS LMDITAEVRA SDAVKLANKH SIS