Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1335 |
Symbol | |
ID | 7271196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1373795 |
End bp | 1377136 |
Gene Length | 3342 bp |
Protein Length | 1113 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643569969 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_002466391 |
Protein GI | 219851959 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGTG TCCTCTATGT TGATGATGAG CCGGCACTTC TGGAACTCGG GAAAATTTTT CTCGAGATGT CAGGTTTTAT CACAGTAGAG ACCGCCCTCT CCGCACAGGA GGGTATCCAG GTGCTGAACA GAACTGTCTT TGACTGTATC GTCTCCGATT ACCAGATGCC AGGAATGGAC GGTCTCGCAT TTCTCAAATA CTTACGAGGA GAGCATAACG GGATCCCGTT CATTCTCTTC ACCGGCCGGG GACGTGAGGA AGTGGTGATC GAAGCGGTGA ACAGTGGTGT GGATTATTAC CTCCAGAAGG GTGGTGATCC CACGTCCCAG TATGTCGATC TGCAGCATAA GATCAAACTG TCGATAGAAC GTCGACGTAC TGAAGATGAA CTGAAAGAAT CCCGACAACA GATGACAGAC ATCATCGACC ACCTGCCGGA TGCCACCTGT GCCGTTGACC TGGATGGGAA GATTATCGCA TGGAACCGGG CCATGGAGGA GATGACCGGG GTACAAAAAG AGCAGATACT GGGAACAGGG GATCATTCCT ATGCTCTTCC ATTTTACGGC ACGAGAAGAC CGATCCTCCT CGACCTCATA TTAAGGAACG ATGAAGAGAC CTGGAAAAAA TATCCAAATA CCTTCAAAGA AGACAATAAA CTGATCTCAG AGATCTATAT TCCCATCCTC TATGGCGGAA AAGGTGCTTA CCTCTGGTTT ATCGCCTCTC CGCTCTATGA TACGCACGGC ACCGTCATTG GGGCAATTGA GTCCATCCGG GATGTCACCG AGCGGAAGCG GCAGGATCAC ATCCTCCATA CCCAGCTGGA CCTTGGTCTT GCACTCCAGT CGATCAGAGG GCTGCATGAT GCGCTGGAGA TCTGTCTATC TGCAGCGATT GAGATCTCCG GCATGGATGC CGGGGGCATC TATCTGGTCG ATGAGGTGCA TGGCTCTCTC GATCTCGCTG TTTCACGGAA TCTCGGGGAC GAGTTCGTAC TAAGTGTCTC CCATTATTCG GCAGATTCCC CCAATACCCG GATAGTGATG ACGGGAAAAC CGATCTATAT CCAGTACAAA AAAACAGGGA TCGTCCATAG TCCAGTCCAG GAACAGGAAG GTCTGAAGGG GTTAATAATC ATCCCGGTCA TGTCCATGGG TAGGGTGATC GCCTGTATCA ATATTTCCTC CCATATTTTT GACGAAATCC CGGCAAATTC CCATATTGGC CTTGAAACGA TCGCTACCCA GATTGGGGCG GCCATCGTGC GAATCCAGGC GGACGAAGCG CTTGCACAGA GCGAGCAGAA GTACCGGAAC GTGGTCGAAG ACCAGACTGA ATTTATCTCC CGTTTCTTAC CGGATGGAAC GCACGTCTTT GTCAACGAGG CATACTGCAG GTATTTCCAA AAGTCGTCTG CTGAGATCAT CGGGACGACG TTCACTCCGC AACAGCCTGC AGAAGACCAG AAAGCGGTAC GGCAGCACAT CAGGGGATTG ACACAGGAGA AGCCGGTAGC AACGATGGAA CACCGGATCG TCATGCCGGA CGGGCAGATC AGATGGCAGC AATGGAGTGA CCGGGCGATC TTTGATGAGG ATGGGGATCT TGTAGAATAC CAGTCAATCG GACGGGACAT CACCGATAGG AAGATGGCCG AGGACGGACT GAATACCGCC TATAAGCAGA TCACGGCAAC AGAAGAAGAG TTGCGTGAAC ACTATGACAA ACTGAAAAAT AGTGGGGATG CACTCCGTGA GAGTGAAGAG AAATACCGGA GCATTCTAGA AAATATTCAG GATGTCTACT ACCGAAGCGA CACTGCGGGA AACCTCATAC TGGCAAGCCC CTCTGCAAAA CAACTGTTAG GGTACGACTT AGAATCAGAG GTGAAAGGGA AGAATATTGC GCAGTCTCTC TATTACTATC CGGAAGAACG CGAAAAATTC CTTGCAGAAC TGGACAGCAG GGGATCAGTC ACCGATTATG AAGTCACGTT GAAAAAGAGG GACGGAACAC CGGTACCTGT CTCCACGAGC AGTCATAACT ACTATGATGC AAACGGCAAT CGCCTCGGTG TTGAGGGAAT CTTCCGGGAC ATCACAGAAC GTAAGAAGAT GGAAGATTCG CTCAAAGCAA ATGAGGAGAA CTACCGATCT CTGGTTGATA ACCTCAATGT GGGGGTCTAC CGGAACACCC CAGAATTCCC TGGCAGGACG ATCTGGGCGA ACCAGGCATT TGTCAGGATA CTTGGATATG ATTCTTTACC TGAACTGTTG GAACACCCGG TCGCCGATAT CTATGCCAAT CAGGATGAGC GGAAAAAGAT CATTCAGGTC CTGGATACAG AGGGTTCTGT CAGGGACAGG GAACTGCACC TGAAGAAGAA AGACGGTACG CAGATCTGGG TTTCAATCAA TGCACAGACA AAAAAGAAGT CGGATGGGAC GATTGAATGG ATTGACGGGA TCTGTGACGA TATCACTGCA TTAAAGGAAG CAGAGGAGAA GGGCAGGCGA TATCAACTCG AGATATCAAG GACCATTGAT TACCTGCCTG ATGCCGCCTT TATAATCAAC CGGAAGGGAA CGGTTATTGC ATGGAACCGG GCGATTGAAG AGATGACCGG GGTCAGAGCA GAGGAGATCG TCGGCAGGGG AGACTATGAA TATGCCATCC CGTTTCATGG ACACCGCCGG CCGATCCTGA TCGATCTTAT CTTTGCATTA GAGGATGCAG TACAAAAAGG AGATTACGTT GAGATAAAAC GGACCGGGGA GATCCTCTCC GTCGAGAGTC CCAATCTGAT ACTCAAAGGT AAACCTTCGA TTGTAAGGGC CATTGCAGCT CCGATCTATG ACGAATCCGG AAATGTCGCT GGTGCCATCG AAACGATCAC TGATATCACC GAATTAAAAC GGGCTCAGGA AGATCTTCGG GTGTCGGAGA ACAGATATCA TACCATCTTT GAGAACACCG GAACTGCTAC CGTCCTCCTT GAGGAGAACA CCACAATATC CCTGGCCAAT GCTGAATTCG AGCGACTGTC TGGATATTCA AGAGAGGAGA TTGAGGGGAA AATGAGCTGG ACTGAATTTG TTTTTCACGA GGATCTTGAG AGAATGTTCA CCCAGCACCA CCTGCGTCGG GAGAGGAATG AGACTGCCCT GAGACATTAC GAGTTCCGGT TTATTACAAA GACAGGTGAG ATCCGCAGTA TCGTCCTGAC CATTGATGTA ATTCCGGGCA CGACGCAGTC TGTTGCTTCC TTAATGGATA TCACCGCCGA GGTCCGTGCA TCGGACGCCG TGAAACTGGC GAACAAACAC TCGATCTCAT AA
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Protein sequence | MYRVLYVDDE PALLELGKIF LEMSGFITVE TALSAQEGIQ VLNRTVFDCI VSDYQMPGMD GLAFLKYLRG EHNGIPFILF TGRGREEVVI EAVNSGVDYY LQKGGDPTSQ YVDLQHKIKL SIERRRTEDE LKESRQQMTD IIDHLPDATC AVDLDGKIIA WNRAMEEMTG VQKEQILGTG DHSYALPFYG TRRPILLDLI LRNDEETWKK YPNTFKEDNK LISEIYIPIL YGGKGAYLWF IASPLYDTHG TVIGAIESIR DVTERKRQDH ILHTQLDLGL ALQSIRGLHD ALEICLSAAI EISGMDAGGI YLVDEVHGSL DLAVSRNLGD EFVLSVSHYS ADSPNTRIVM TGKPIYIQYK KTGIVHSPVQ EQEGLKGLII IPVMSMGRVI ACINISSHIF DEIPANSHIG LETIATQIGA AIVRIQADEA LAQSEQKYRN VVEDQTEFIS RFLPDGTHVF VNEAYCRYFQ KSSAEIIGTT FTPQQPAEDQ KAVRQHIRGL TQEKPVATME HRIVMPDGQI RWQQWSDRAI FDEDGDLVEY QSIGRDITDR KMAEDGLNTA YKQITATEEE LREHYDKLKN SGDALRESEE KYRSILENIQ DVYYRSDTAG NLILASPSAK QLLGYDLESE VKGKNIAQSL YYYPEEREKF LAELDSRGSV TDYEVTLKKR DGTPVPVSTS SHNYYDANGN RLGVEGIFRD ITERKKMEDS LKANEENYRS LVDNLNVGVY RNTPEFPGRT IWANQAFVRI LGYDSLPELL EHPVADIYAN QDERKKIIQV LDTEGSVRDR ELHLKKKDGT QIWVSINAQT KKKSDGTIEW IDGICDDITA LKEAEEKGRR YQLEISRTID YLPDAAFIIN RKGTVIAWNR AIEEMTGVRA EEIVGRGDYE YAIPFHGHRR PILIDLIFAL EDAVQKGDYV EIKRTGEILS VESPNLILKG KPSIVRAIAA PIYDESGNVA GAIETITDIT ELKRAQEDLR VSENRYHTIF ENTGTATVLL EENTTISLAN AEFERLSGYS REEIEGKMSW TEFVFHEDLE RMFTQHHLRR ERNETALRHY EFRFITKTGE IRSIVLTIDV IPGTTQSVAS LMDITAEVRA SDAVKLANKH SIS
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