| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1329 |
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| Symbol | |
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| ID | 7271190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1364412 |
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| End bp | 1366745 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569963 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_002466385 |
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| Protein GI | 219851953 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGTC ACGAGATCGA ATTTTTAAAG AGGCTGCTGG TCACCTACCG CACCGAGGCT
CAGGAGCATC TCGCCACCCT CTCTTCCCAG CTGGTCGAAC TGGAGGCCAG CAGGGATGAC
CAGGTGAAGT CTCGGGAGAT CCTGGAACTG GTCTTCCGGG AGGCGCACAG TCTGAAGGGC
GCCTCCAGGG CGGTGAACCT GGTCCAGGTC GAGAGGGTCT GCCAGGCGAT CGAGAGCGTC
TTCTCGGTCC TCAAACAGCA GAGCGCCTCC CCGTCAAAGG AGCTCTTCGA TCTCTTCTCT
GAAGTCATCG ACACCGTCAG GACGATGGTG GCGGCCGCCG ATCCCCAGGT CCCCCAGCCC
GAGAGTCCGC AGACGAAGCG GTTGATCGCC CGTCTCGAAC ACCTGGCCAG AAACGTTGCA
GCCACTCAGG CAGGGCCTGC AGCGAATGTC GCGACCGGGA TAGAACCCCT GGAGGGAACG
GCCGGCGGCG GCACCCCGGG GACCCTCGAG GGGATCGGGC CTGTCAGAAA GGCAAAGGAC
GAGGTGGTGC CGGAGACGAC CGTCAGGATC TCCGTCGATA AACTCGAACG GATCCTCCAC
CAGGTTGAGG AGTTCCTCCT CCTGAAGCTG GCGGTAAACG ACCAGTTCAG TGAACTGCAG
AGGATCCAGG CCCTGGTTGA GTCCTGGAGC GACGAATGGA CGCGCGTTTC CTCCGACCTC
GTCACCCTCC GCCAGGTCAC CGGTGCTGCG TCATCTGAAC GACTTGAACG GGTCCAGCCT
TTCATCGAGC GCCAGCTGAC CTTCCTTGAC TGGAACCACC AGTTCATGCG GTCCCTGGAC
GGGGGTTTGA ACGGATCGAT CCGTTGCATG GATCGGGGCC GGCGATCCCT CGAGACCCTG
GTCGACACTC TCCTCGATGA CATGCGGGAT GTCCTGATGC TTCCTGCTTC TTCCCTGTTT
GATTCATTCC CGCGGTTGGT TCGGGACCTT GCACAGGCCC TGGGCAAGGA GGTGCGGCTC
GAGATCCGGG GGAGCAGCAT TGCGATCGAT CGCAGGGTTC TGGACGAGAT GCACGACCCG
CTGATCCACC TGCTGCGAAA CGCGATCGAT CATGGGATCG AACCCCTCAC AATACGGAAG
GAGCAGAAGA AGACCCGGTA CGGACAGATT ACGATCGAGA TCGAGCTTCG GAGCGGGAGA
CAGGTGGGGA TCACGATCGC TGATGACGGG GCCGGCGTCG ATCTCCCCCA GGTAAAGCGG
GCGGCGGTGA AGGGGGGTCT CATCTCCGAA CGGGAGGCCG AGCGGATGAA CGATCAGGAG
GTGACCAACC TCCTCTTTCG GTCAGGGATA TCGACCAGCC CGATCATCAC CGATCTCTCC
GGTCACGGTC TCGGCCTGGC CATCGTGCTT GAGAAGGTCG AAAAACTGGG CGGGAGCGTG
ACCGTCGAGA GCACCCCTGG TGCGGGCACA TCCTTCCACC TGCTCCTGCC GCTCACCCTG
GTGAAATTCA AGGGGGTGCT GGTCACTCAG GATAACCGGT CGTTCGTCTT CCCGATGGCC
TATGTCGAGC GGACGCTCCA GGTGTCGGTA GAATCGATCG CAGCGGTCCA GAACCACAAG
ACCCTGCTGT ACGAAGGGGA GTTCATTCCA GTGGTGAGGC TCGGCAGCGT CCTGGAACTC
CCGGATCCCC CTATGAGGGA GGCACAGACG AAGGTCTCGA TCGTCGTGGC ACGGGCCTCG
AAGACCAGGA TCGGGTTCTC GGTCGACGAA GTCCGCAATG AACAGGATGT GCTCGTCAAG
AGCCTTGGAA AACAGCTCTC GCGGGTGCGG AACATCTCTG GAACCACGGT GATCGGCAAT
GGGACACTGG TACCGATCCT GCATGTACCG GACCTGATCA AGTCGGTGTT GAAGCCCGGG
GCCGGGGCGA GGTATGGCCG CGAGGTCGTC GTCGCCGGAA GGCTCCCCTC TTCCATCCTG
GTGGCCGAGG ATTCGATCAC CTCACGGACC CTTCTGAAGA ACATCCTCGA GTCGGCAGGT
TATCGGGTGA CGACAGCGGT CGACGGCCAG GATGCATGGA ACGTCCTGAT CTCCGGGGCC
TTCGACCTGG TCGTCTCGGA TGTCGACATG CCCCGGATGA GCGGATTCGA CCTCACCAGA
AAGATCCGGA GCGATCAGCG GCATGCTGAC CTGCCGGTGG TCCTGGTCAC CTCCCTCGAC
TCTGCAGGTG ACCGGGAACA GGGGATCGAG GTGGGCGCCA ATGCCTATAT CGTGAAGAGC
AGCTTCGATC AATCGAACCT GATCGAGATC ATCGATCGGC TGGCAGGACC ATGA
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| Protein sequence | MDSHEIEFLK RLLVTYRTEA QEHLATLSSQ LVELEASRDD QVKSREILEL VFREAHSLKG
ASRAVNLVQV ERVCQAIESV FSVLKQQSAS PSKELFDLFS EVIDTVRTMV AAADPQVPQP
ESPQTKRLIA RLEHLARNVA ATQAGPAANV ATGIEPLEGT AGGGTPGTLE GIGPVRKAKD
EVVPETTVRI SVDKLERILH QVEEFLLLKL AVNDQFSELQ RIQALVESWS DEWTRVSSDL
VTLRQVTGAA SSERLERVQP FIERQLTFLD WNHQFMRSLD GGLNGSIRCM DRGRRSLETL
VDTLLDDMRD VLMLPASSLF DSFPRLVRDL AQALGKEVRL EIRGSSIAID RRVLDEMHDP
LIHLLRNAID HGIEPLTIRK EQKKTRYGQI TIEIELRSGR QVGITIADDG AGVDLPQVKR
AAVKGGLISE REAERMNDQE VTNLLFRSGI STSPIITDLS GHGLGLAIVL EKVEKLGGSV
TVESTPGAGT SFHLLLPLTL VKFKGVLVTQ DNRSFVFPMA YVERTLQVSV ESIAAVQNHK
TLLYEGEFIP VVRLGSVLEL PDPPMREAQT KVSIVVARAS KTRIGFSVDE VRNEQDVLVK
SLGKQLSRVR NISGTTVIGN GTLVPILHVP DLIKSVLKPG AGARYGREVV VAGRLPSSIL
VAEDSITSRT LLKNILESAG YRVTTAVDGQ DAWNVLISGA FDLVVSDVDM PRMSGFDLTR
KIRSDQRHAD LPVVLVTSLD SAGDREQGIE VGANAYIVKS SFDQSNLIEI IDRLAGP
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