| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1297 |
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| Symbol | gatA |
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| ID | 7271157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 1327924 |
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| End bp | 1329225 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643569931 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002466354 |
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| Protein GI | 219851922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.911419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGTG AACAGGAGGA CCAGTTCAAC GCGTTCATCA CCCGATGCAC GACCGATAGG
GATAAATCGG ATCGGCAGAG GACCGGCCGG CTGGCCGGTC AGTACATCGC AGTCAAGGAT
AACATCACCA CATCCGGGAT CATGACCACC TGCGGTTCTG CGATCCTGAA CGGATATATT
CCCCCCTATG ATGCGCATGT GATCACCAAA ATAGTGAATG AAGGGGCGAT CATCGCAGGG
AAGACCAATA TGGATGAGTT CGGGATGGGG ACCACGACAG AGAACAGTGC TTTTGGGCCG
ACCAGGAATC CGGTGAACCC GGAACGGGTG CCCGGCGGTT CTTCCGGCGG CTCGGCAGCT
GCGGTGGCGG CCGGTCTGGT GCCGATGGCG CTCGGGACCG ATACCGGCGG CTCGATTCGA
TGTCCTGCTT CGTTCTGTGG AATCGTGGGG CTCAAACCCA CCTATAGTCG GGTCTCCCGG
TACGGGCTGA TCGCCTATGC CAATTCGCTC GAACAGATCG GACCGATGGC ACGGACCGTG
ACCGGGGTAT CGGACCTGAT GCAGGTGATC GCCGGGTATG ATTCCCGGGA CGCCACCTCC
ACCGATCATC CCTACCATCA TACGCCCAGT GCAGATATCT CCGGAAAACG GATCGGGGTG
CCGGAGGAGT TCTTCGGTAC AGGGGTCGAC GCCCACGTCG CCGAAACGGT CAGAAAGGCA
ATCGACCGGC TGGAGGCCGG CGGGGCTGAG ATCGTCCCCT GCTCGATGAA GAGTATGGCC
TATGCCCTGG CCGCCTATTA TGTGATCTGT ACCTCTGAGG CGAGTTCGAA CCTGGCCAGG
TATGACGGCG TCAGGTACGG CGTTCCGGTC GATACCACAC CTCAGTGGCA CGACGCCTTT
CGGGCGGTGC GTGGCGAAAG GTTCGGTCCG GAAGTGCAGC GCCGGATCCT GCTCGGCACC
TTCGCCCTCT CTGCAGGCTA TTATGGAAAG TACTATGCCA AGGCGCAGAT CGCCAGGCAG
CAGGTCCGGG CAGACTTCGA CCGGCTCTTT CAGGAGGTCG ATCTCCTTGC CGGGCCGACG
ATGCCGACCG TGGCCTTCAG GCTCGGGGAG ATGGCAGATC CGCTCTCGAT GTACCTTGCG
GACATCCTGA CGGTGCCGGC GAACCTGGCC GGGGTGCCGG CGATCTCGGT GCCCTGCGGC
ACGGTCGACG GGATGCCGGT CGGTCTGCAG GTGATGGGGA GGCCGTTCGA TGACGAAGGG
GTCGTGGACG CTGCCTATGC CTACGAACAG GGGGCGATCT GA
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| Protein sequence | MAGEQEDQFN AFITRCTTDR DKSDRQRTGR LAGQYIAVKD NITTSGIMTT CGSAILNGYI
PPYDAHVITK IVNEGAIIAG KTNMDEFGMG TTTENSAFGP TRNPVNPERV PGGSSGGSAA
AVAAGLVPMA LGTDTGGSIR CPASFCGIVG LKPTYSRVSR YGLIAYANSL EQIGPMARTV
TGVSDLMQVI AGYDSRDATS TDHPYHHTPS ADISGKRIGV PEEFFGTGVD AHVAETVRKA
IDRLEAGGAE IVPCSMKSMA YALAAYYVIC TSEASSNLAR YDGVRYGVPV DTTPQWHDAF
RAVRGERFGP EVQRRILLGT FALSAGYYGK YYAKAQIARQ QVRADFDRLF QEVDLLAGPT
MPTVAFRLGE MADPLSMYLA DILTVPANLA GVPAISVPCG TVDGMPVGLQ VMGRPFDDEG
VVDAAYAYEQ GAI
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