Gene Mpal_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1288 
Symbol 
ID7271148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1318329 
End bp1318670 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content51% 
IMG OID643569922 
Productzinc finger SWIM domain protein 
Protein accessionYP_002466345 
Protein GI219851913 
COG category[S] Function unknown 
COG ID[COG5431] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0507632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.525575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACC TCTGGGCTGA TATCGAGGAG GCCGGAGCCC TGACTGAACC GCTTCGGGCT 
GCCGTGATTG AGCAGTATAA AAATCGGGGG ATCAAGGCCC TGGAGGCTCT GGATGAGGAG
AGGGTACAGA AGTACCTGGA CTTCTGGGTC GTGGTCGGTA CCAATGACAG ATATATTGTT
GACGAGGACT TCTGTACGTG CAACGACTTC ATCTATCGTG GCGGCAGTTG CTGTCATATT
CTGGCAGTCA AAATCGCGCA ACTCACTGGA ATTTTTCAGG AATACGCCCG TTGGTACCTC
GATGAGCGAC CATTCTGCAT GAACAACCAA CAGTATTTAT GA
 
Protein sequence
MSDLWADIEE AGALTEPLRA AVIEQYKNRG IKALEALDEE RVQKYLDFWV VVGTNDRYIV 
DEDFCTCNDF IYRGGSCCHI LAVKIAQLTG IFQEYARWYL DERPFCMNNQ QYL