| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1287 |
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| Symbol | alaS |
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| ID | 7271147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1315551 |
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| End bp | 1318292 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569921 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002466344 |
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| Protein GI | 219851912 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.460274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.758822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG AAGATTACGA GCTCGATTAT TTCAAATCCG AGGGGCTGGT TCGGAAGACC
TGCACGTCCT GTGGGGCATC ATTCTGGACA CGCGATCCTG AGCGTCAGGT CTGCGGGGAT
GCACCCTGTG AGCCCTACAA TTTCATCGGA AATCCTGTCT TTCGACCGCA TACCCTCGAT
GAGATGCGGG AAGCTTATCT CTCATTCTTT GAGCGCCACG GGCATACCCG GATCGACCGG
TACCCCGTCG CAGCTCGATG GCGGGACGAT ATCTACCTGA CGATCGCCTC GATTGCTGAT
TTTCAGCCCT ATGTGACGAG CGGTGTCGTA CCTCCGCCGG CAAACCCGCT GACGATCTCC
CAGCCCTGCA TCCGTCTGAA CGATCTGGAC TCGGTCGGAC GATCCGGCCG GCACCTGACC
CTCTTTGAGA TGATGGCTCA TCATGCCTTC AATTCGCCCA AAGAAGAGAT CTACTGGAAG
GACCACACCG TCGAACTCTG CGACGAGTTT GTACACTCCA TCGGCGGCGA CCTGAATGCG
ATCACCTACA AGGAGCACCC CTGGATCGGC GGAGGAAATG CCGGTCCATC AGTTGAAGTG
ATGATCGGTG GGCTTGAGAT CGCCACACTG GTCTTTATGA GCCTTGGGCG GCAGAAGACC
GATCACCCCC CTGTCGAACT GGAAGGGAAC CAGTATTACC CGATGTCGAC CAGGGTCGTC
GACACCGGAT ACGGGCTCGA ACGGATGGTC TGGGCCTCGA CCGGTTCGCC GACCATCTAT
GATGCCGTCT TCCCGGATAT GGTCAGCACC ATCATGCACT CTGCCGGGCT CGACCATCAC
CTGGATAACC CGGAAAGCAC GAAGATGCTG GCCCTGAACG CCAAGTTCGC CGGGCTTATG
GACATCTCCG GTGCCAACCT CTTCCAGCTC AGAAAGAAGG TAGCCGCCAC AATCGATGTT
CCGATCGAGA AACTCCAGAA GATGATCGTC CCGATCGAAC AGGTCTACAC GATCGCCGAC
CACACCCGAT GTCTGGCATA CATGCTTGGG GATTTGATCG TCCCGTCCAA TGTCAGGGAA
GGGTATCTGG CCCGGCTCGT GCTACGGCGG ACACTGCGGG TCATGAACGA CCTCAAGATG
GACATCGACC TCGGGGATCT GATAGAGATG CAGATCAACA AGATCGGAAA CAGCCAGTTC
GAGCAGAACC TGGATGTCAT CCACGAGATC GTGGACCGCG AGGTCGAGAA GTATGCGGCA
ACCATCGAAC GGGGTACCCG GATCATTCAG AAGGTCGCCA CCACCTACAA GAAGAAGAGT
GAGAAGGTAC CACTCCAAGA GGTGGTCACT CTCTACGATT CGCATGGCCT GCCACCCGAG
TTGATCAAGG AAGTCGCCTC AAAAGAGGGA GCCGTGGTCG ACCTGCCGGA TAACTTCTAC
TCCCTGATCG CCGATATGCA TTCTGAGAGC CAGAAAGAGC AGGTGGACGA TCCCCTTGAA
TCGTACCGAG AACGGGTCAG CGGGTTGCCG GACACGCATC CCCTCTATTA TGAACTTCCC
ACCGAGGTGG AGTTCGAGGG GATGGTTCTG GACTTCTTCG ACGGGTATGT AATCCTGGAC
CAGACCCTCT TCTATCCAGA AGGAGGTGGC CAGCCTGCAG ATACCGGAAC CCTTGTCACG
GCCGAGTCTA TGGTCCGGGT CGAGGACACC ATCAAGATGG GCGGCGTGAT CCTGCATAAG
ATCAGTGGTG GGAGCCTGAA ACGCGGCGAA CGGGTGAAAG GGATGGTCGA TGAAGACCGG
AGATGGTCGC TGATGCGCCA TCATACGGCC ACGCACATCC TGCTCCATGC CAGCAAAGAG
GTGCTCGGCG CCCATATTCA TCAGTCCGGC GCTCAGAAGG GAAGTGAGAG CTCGCGTATC
GATATCAGGC ACTTCAAGCA TATCACGCCT GAAGAACTGC GCAGGATCGA GGTGAAGGCG
AACCAGATCG TGATGAAGAA CAGGCCGATC TCGATCAAGA TCGAGGAACG GACCAAAGCC
GAACAGAAGT ATGGTTTCGG GCTGTACCAG GGTGGGGTTC CCCCGGGTAA AGAGATTCGG
ATTGTGAAGG TCGACGGCGA TATCGAGGCC TGTGCAGGGA CGCACTGCAA GTCTACGGGC
GAAGTCGGTG CGATCAAGAT CCTCCGGGTC GAGCACATCC AGGACGGGAT CGAGCGGATC
GAATTCTCAG CCGGCAGAGC AGCGATCACG GCGATGCAGC ATGTCGAACA GTTGCTGGAT
GAGTCAGCTC AGACGCTCCG CATCCAGCCA GAGAACCTGC CGAGCAGCGT GCAGCGGTTC
TTCACCGAAT GGAAAGAGCG GGGGAAAGAG GTCGAACGGC TCAGGGCACG GCTGGTAGAC
CTCGAACTGC AGAACGTCAG GTACGAATCG GTCAGAGGGG TGAACCTTGT GATCAAAGAG
ATCGATGTGG ATCCATCACA ACTGGCATCA CTGGCACGGA AACTGTCCAA AAACGACGGA
GTTGCTCTGC TCGCCTCCAG CACGGATACG CTCCACCTGG TCCTCTCATC AGGGAGTAGA
TCCGTGGATG CAGGCAAGAT CCTCGGTCAG ATCGCGCTGC TCATCGATGG AAAAGGCGGT
GGCAACGCCA CGATGGCTCA TGGGATCAGC GAGGACCGGT CTCAACTCGA GCCTGCTCTG
CAGGCTGGCA AGAAACTGAT CCTGGCCTCC CTCGGCGCCT GA
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| Protein sequence | MSEEDYELDY FKSEGLVRKT CTSCGASFWT RDPERQVCGD APCEPYNFIG NPVFRPHTLD
EMREAYLSFF ERHGHTRIDR YPVAARWRDD IYLTIASIAD FQPYVTSGVV PPPANPLTIS
QPCIRLNDLD SVGRSGRHLT LFEMMAHHAF NSPKEEIYWK DHTVELCDEF VHSIGGDLNA
ITYKEHPWIG GGNAGPSVEV MIGGLEIATL VFMSLGRQKT DHPPVELEGN QYYPMSTRVV
DTGYGLERMV WASTGSPTIY DAVFPDMVST IMHSAGLDHH LDNPESTKML ALNAKFAGLM
DISGANLFQL RKKVAATIDV PIEKLQKMIV PIEQVYTIAD HTRCLAYMLG DLIVPSNVRE
GYLARLVLRR TLRVMNDLKM DIDLGDLIEM QINKIGNSQF EQNLDVIHEI VDREVEKYAA
TIERGTRIIQ KVATTYKKKS EKVPLQEVVT LYDSHGLPPE LIKEVASKEG AVVDLPDNFY
SLIADMHSES QKEQVDDPLE SYRERVSGLP DTHPLYYELP TEVEFEGMVL DFFDGYVILD
QTLFYPEGGG QPADTGTLVT AESMVRVEDT IKMGGVILHK ISGGSLKRGE RVKGMVDEDR
RWSLMRHHTA THILLHASKE VLGAHIHQSG AQKGSESSRI DIRHFKHITP EELRRIEVKA
NQIVMKNRPI SIKIEERTKA EQKYGFGLYQ GGVPPGKEIR IVKVDGDIEA CAGTHCKSTG
EVGAIKILRV EHIQDGIERI EFSAGRAAIT AMQHVEQLLD ESAQTLRIQP ENLPSSVQRF
FTEWKERGKE VERLRARLVD LELQNVRYES VRGVNLVIKE IDVDPSQLAS LARKLSKNDG
VALLASSTDT LHLVLSSGSR SVDAGKILGQ IALLIDGKGG GNATMAHGIS EDRSQLEPAL
QAGKKLILAS LGA
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