| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_1283 |
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| Symbol | |
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| ID | 7271143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 1311812 |
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| End bp | 1312603 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643569917 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_002466340 |
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| Protein GI | 219851908 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0692096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.795749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGGAG AGAGTTATCT CGGGCGAAGC GATGCCCCAA TCACTGCTGA AACATGGACG
ATCATTGATA CAACGATGGT GGAAGCCGCA AAGAGTATGC TGACCGGCCG GCGCCTCCTT
CATCTCGAAG GGCCCTATGG CCTCGGGCTG AAGGCAATCC CGCTGCAGGA CAGTGTTTCG
GAGGGGAACC TGATCCGGTC AGGGTTCGCC CCTGTCGACC TGATCCAGAC CAGCTTCTCG
CTGAGCAAAC GTGACCTGGC CGCATACGAG CGGGACGGAA TGCTCCCGAA CACGTCGGCC
GTAGCCGTTG CAGCCATCGA GGCCGCCCGG CAGGAGGATG CGGTGATCTT CACCGGCACC
GATCAGGTGA AAGGGCTGAT GAACACAGGA GGGTCTCAGT CCGTTAAACT CGCCAGTTGG
GAGAAGATTG GGGCGGCTGC CGACGACCTG ATCAAGGCCG TCACCGCACT GGACCTGGCA
GGGTTCCATG GCCCCTACGC CCTGGCCCTG TCGCCGGCCC GCTACAACCT GCTCTTCCGG
CGGTATCCGC AGGGGTCGAC CACCGAGCTC GAACACCTGC AGCAGATGAT CACCGACGGA
ATCTTCAAGG CACCAGTCCT GAAGGACGGT GGGGTGCTGA TCGCGACTGG ACAGCAGTAC
GCCGCCATCG TCCTCGGACA GGATATGACG ATCGGGTTCA CCGGACCGTC CAAGGAGAGC
CTGGACTTCA CGATCTCAGA GAGCCTGGCG CTGTTGATCA GAGAGCCAAA GGCGATCTGT
GCGCTGAAGT GA
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| Protein sequence | MVGESYLGRS DAPITAETWT IIDTTMVEAA KSMLTGRRLL HLEGPYGLGL KAIPLQDSVS
EGNLIRSGFA PVDLIQTSFS LSKRDLAAYE RDGMLPNTSA VAVAAIEAAR QEDAVIFTGT
DQVKGLMNTG GSQSVKLASW EKIGAAADDL IKAVTALDLA GFHGPYALAL SPARYNLLFR
RYPQGSTTEL EHLQQMITDG IFKAPVLKDG GVLIATGQQY AAIVLGQDMT IGFTGPSKES
LDFTISESLA LLIREPKAIC ALK
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