Gene Mpal_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1282 
Symbol 
ID7271142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1310489 
End bp1310902 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID643569916 
ProductRieske (2Fe-2S) domain protein 
Protein accessionYP_002466339 
Protein GI219851907 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.580287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.705623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG TCACCGTTGC TAAGACCGGG GAAATACCTC CCGGGACCAT GAAACATATT 
GAGATTGCAG AAAAAGAACT GTGTATCGCC AATGTCGAGG GGGAGTTCTA TGCTATTGGA
GATCGGTGCG GTCACGAGAA TGCAAGTCTT GCAAAGGGCA CGTTGGAGGG GACATTGGTC
ATCTGCCCTA TGCACTCTTC AAAATTTGAT ATAACTACGG GAAAAAAAGT GGCCGGGCCG
GTTCTTGAGC TGGCCGGTAT CACCAAGAAA TTCGGCGGAT GTCCTGAACA CGTGAGAAAA
GAGATGGGGG AGATGTTTGA GGGTATTACT GCAGCGCAGA GCTCGATCAA GACATATGAT
CTACCAACCT ATGATGTGAA AATAGACGGC GAAAATGTCC TGGTGAACGT GTAA
 
Protein sequence
MSFVTVAKTG EIPPGTMKHI EIAEKELCIA NVEGEFYAIG DRCGHENASL AKGTLEGTLV 
ICPMHSSKFD ITTGKKVAGP VLELAGITKK FGGCPEHVRK EMGEMFEGIT AAQSSIKTYD
LPTYDVKIDG ENVLVNV